Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Upk3bQ80YF6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk3bQ80YF6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Upk3bQ80YF6 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.15■□□□□ 0.02
Upk3bQ80YF6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
Upk3bQ80YF6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Upk3bQ80YF6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk3bQ80YF6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk3bQ80YF6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk3bQ80YF6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk3bQ80YF6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk3bQ80YF6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Upk3bQ80YF6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk3bQ80YF6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Upk3bQ80YF6 Gm13534-201ENSMUST00000121169 513 ntBASIC15.14■□□□□ 0.01
Upk3bQ80YF6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk3bQ80YF6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Upk3bQ80YF6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk3bQ80YF6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk3bQ80YF6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Upk3bQ80YF6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk3bQ80YF6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Upk3bQ80YF6 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.14■□□□□ 0.01
Upk3bQ80YF6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk3bQ80YF6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk3bQ80YF6 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk3bQ80YF6 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Upk3bQ80YF6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.14■□□□□ 0.01
Upk3bQ80YF6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Gm45417-201ENSMUST00000209533 758 ntBASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
Upk3bQ80YF6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Gm22325-201ENSMUST00000158904 308 ntBASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Upk3bQ80YF6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk3bQ80YF6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk3bQ80YF6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk3bQ80YF6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk3bQ80YF6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk3bQ80YF6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Upk3bQ80YF6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk3bQ80YF6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk3bQ80YF6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk3bQ80YF6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.11■□□□□ 0.01
Upk3bQ80YF6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Upk3bQ80YF6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Upk3bQ80YF6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk3bQ80YF6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Upk3bQ80YF6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk3bQ80YF6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk3bQ80YF6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Upk3bQ80YF6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk3bQ80YF6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms