Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim36Q80WG7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim36Q80WG7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Trim36Q80WG7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim36Q80WG7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trim36Q80WG7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim36Q80WG7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim36Q80WG7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Trim36Q80WG7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim36Q80WG7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim36Q80WG7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trim36Q80WG7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Trim36Q80WG7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim36Q80WG7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim36Q80WG7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim36Q80WG7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim36Q80WG7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim36Q80WG7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trim36Q80WG7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim36Q80WG7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim36Q80WG7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.26■□□□□ 0.35
Trim36Q80WG7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Trim36Q80WG7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim36Q80WG7 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.26■□□□□ 0.35
Trim36Q80WG7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim36Q80WG7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Trim36Q80WG7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim36Q80WG7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim36Q80WG7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim36Q80WG7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim36Q80WG7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim36Q80WG7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Trim36Q80WG7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim36Q80WG7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim36Q80WG7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim36Q80WG7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim36Q80WG7 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.25■□□□□ 0.35
Trim36Q80WG7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim36Q80WG7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim36Q80WG7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trim36Q80WG7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim36Q80WG7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim36Q80WG7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim36Q80WG7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim36Q80WG7 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.24■□□□□ 0.35
Trim36Q80WG7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim36Q80WG7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim36Q80WG7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim36Q80WG7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Trim36Q80WG7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim36Q80WG7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim36Q80WG7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.24■□□□□ 0.35
Trim36Q80WG7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim36Q80WG7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim36Q80WG7 Gm13534-201ENSMUST00000121169 513 ntBASIC17.24■□□□□ 0.35
Trim36Q80WG7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.24■□□□□ 0.35
Trim36Q80WG7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim36Q80WG7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim36Q80WG7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim36Q80WG7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim36Q80WG7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim36Q80WG7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trim36Q80WG7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trim36Q80WG7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim36Q80WG7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim36Q80WG7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim36Q80WG7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim36Q80WG7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim36Q80WG7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim36Q80WG7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim36Q80WG7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim36Q80WG7 Mir5133-201ENSMUST00000174955 77 ntBASIC17.23■□□□□ 0.35
Trim36Q80WG7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.23■□□□□ 0.35
Trim36Q80WG7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.23■□□□□ 0.35
Trim36Q80WG7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim36Q80WG7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim36Q80WG7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trim36Q80WG7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim36Q80WG7 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.22■□□□□ 0.35
Trim36Q80WG7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim36Q80WG7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim36Q80WG7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Trim36Q80WG7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.22■□□□□ 0.35
Trim36Q80WG7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim36Q80WG7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim36Q80WG7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim36Q80WG7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim36Q80WG7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim36Q80WG7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim36Q80WG7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim36Q80WG7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim36Q80WG7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim36Q80WG7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim36Q80WG7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trim36Q80WG7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim36Q80WG7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim36Q80WG7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim36Q80WG7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Trim36Q80WG7 Gm6420-201ENSMUST00000193885 723 ntBASIC17.21■□□□□ 0.35
Trim36Q80WG7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms