Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Otop1Q80VM9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Otop1Q80VM9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Otop1Q80VM9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Otop1Q80VM9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Otop1Q80VM9 AA414768-201ENSMUST00000121924 1257 ntBASIC17.13■□□□□ 0.33
Otop1Q80VM9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.13■□□□□ 0.33
Otop1Q80VM9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.13■□□□□ 0.33
Otop1Q80VM9 Mir6349-201ENSMUST00000184059 97 ntBASIC17.13■□□□□ 0.33
Otop1Q80VM9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.13■□□□□ 0.33
Otop1Q80VM9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Otop1Q80VM9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Otop1Q80VM9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Otop1Q80VM9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Otop1Q80VM9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Otop1Q80VM9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Otop1Q80VM9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Otop1Q80VM9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Otop1Q80VM9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Otop1Q80VM9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Otop1Q80VM9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.12■□□□□ 0.33
Otop1Q80VM9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.12■□□□□ 0.33
Otop1Q80VM9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Otop1Q80VM9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Otop1Q80VM9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Otop1Q80VM9 Gm6345-202ENSMUST00000180900 204 ntBASIC17.12■□□□□ 0.33
Otop1Q80VM9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.12■□□□□ 0.33
Otop1Q80VM9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Otop1Q80VM9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Otop1Q80VM9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Otop1Q80VM9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Otop1Q80VM9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Otop1Q80VM9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Otop1Q80VM9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.12■□□□□ 0.33
Otop1Q80VM9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Otop1Q80VM9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Otop1Q80VM9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Otop1Q80VM9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Otop1Q80VM9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Otop1Q80VM9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Otop1Q80VM9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Otop1Q80VM9 Gm33142-201ENSMUST00000193913 867 ntBASIC17.11■□□□□ 0.33
Otop1Q80VM9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Otop1Q80VM9 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.11■□□□□ 0.33
Otop1Q80VM9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Otop1Q80VM9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Otop1Q80VM9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Otop1Q80VM9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Otop1Q80VM9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Otop1Q80VM9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Otop1Q80VM9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Otop1Q80VM9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Otop1Q80VM9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Otop1Q80VM9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Otop1Q80VM9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Otop1Q80VM9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Otop1Q80VM9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Otop1Q80VM9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Otop1Q80VM9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Otop1Q80VM9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Otop1Q80VM9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Otop1Q80VM9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.1■□□□□ 0.33
Otop1Q80VM9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Otop1Q80VM9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Otop1Q80VM9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Otop1Q80VM9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Otop1Q80VM9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Otop1Q80VM9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.1■□□□□ 0.33
Otop1Q80VM9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Otop1Q80VM9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Otop1Q80VM9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.09■□□□□ 0.33
Otop1Q80VM9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Otop1Q80VM9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Otop1Q80VM9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Otop1Q80VM9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Otop1Q80VM9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Otop1Q80VM9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.09■□□□□ 0.33
Otop1Q80VM9 Gm18032-201ENSMUST00000222541 538 ntBASIC17.09■□□□□ 0.33
Otop1Q80VM9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Otop1Q80VM9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Otop1Q80VM9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Otop1Q80VM9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Otop1Q80VM9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Otop1Q80VM9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Otop1Q80VM9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Otop1Q80VM9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Otop1Q80VM9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Otop1Q80VM9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Otop1Q80VM9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Otop1Q80VM9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Otop1Q80VM9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Otop1Q80VM9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Otop1Q80VM9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.08■□□□□ 0.33
Otop1Q80VM9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Otop1Q80VM9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.08■□□□□ 0.32
Otop1Q80VM9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Otop1Q80VM9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Otop1Q80VM9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Otop1Q80VM9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Otop1Q80VM9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms