Protein–RNA interactions for Protein: Q80UV9

Taf1, Transcription initiation factor TFIID subunit 1, mousemouse

Predictions only

Length 1,891 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1Q80UV9 Gm30025-201ENSMUST00000218555 728 ntBASIC19.2■□□□□ 0.66
Taf1Q80UV9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.2■□□□□ 0.66
Taf1Q80UV9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Taf1Q80UV9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Taf1Q80UV9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Taf1Q80UV9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.2■□□□□ 0.66
Taf1Q80UV9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.19■□□□□ 0.66
Taf1Q80UV9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Taf1Q80UV9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Taf1Q80UV9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Taf1Q80UV9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Taf1Q80UV9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.19■□□□□ 0.66
Taf1Q80UV9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.19■□□□□ 0.66
Taf1Q80UV9 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.19■□□□□ 0.66
Taf1Q80UV9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Taf1Q80UV9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Taf1Q80UV9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Taf1Q80UV9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Taf1Q80UV9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Taf1Q80UV9 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.18■□□□□ 0.66
Taf1Q80UV9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Taf1Q80UV9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Taf1Q80UV9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Taf1Q80UV9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Taf1Q80UV9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.18■□□□□ 0.66
Taf1Q80UV9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Taf1Q80UV9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.18■□□□□ 0.66
Taf1Q80UV9 Gm11539-201ENSMUST00000119837 557 ntBASIC19.18■□□□□ 0.66
Taf1Q80UV9 Gm13436-201ENSMUST00000120418 567 ntBASIC19.18■□□□□ 0.66
Taf1Q80UV9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.18■□□□□ 0.66
Taf1Q80UV9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Taf1Q80UV9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Taf1Q80UV9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Taf1Q80UV9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Taf1Q80UV9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Taf1Q80UV9 Idnk-204ENSMUST00000226010 1898 ntBASIC19.17■□□□□ 0.66
Taf1Q80UV9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Taf1Q80UV9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Taf1Q80UV9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.17■□□□□ 0.66
Taf1Q80UV9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Taf1Q80UV9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Taf1Q80UV9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Taf1Q80UV9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Taf1Q80UV9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Taf1Q80UV9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Taf1Q80UV9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Taf1Q80UV9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Taf1Q80UV9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Taf1Q80UV9 Gm10418-201ENSMUST00000100943 576 ntBASIC19.16■□□□□ 0.66
Taf1Q80UV9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Taf1Q80UV9 Gm13401-201ENSMUST00000117074 291 ntBASIC19.16■□□□□ 0.66
Taf1Q80UV9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Taf1Q80UV9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Taf1Q80UV9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Taf1Q80UV9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Taf1Q80UV9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Taf1Q80UV9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Taf1Q80UV9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Taf1Q80UV9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Taf1Q80UV9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Taf1Q80UV9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Taf1Q80UV9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Taf1Q80UV9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Taf1Q80UV9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Taf1Q80UV9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Taf1Q80UV9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Taf1Q80UV9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Taf1Q80UV9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Taf1Q80UV9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Taf1Q80UV9 Gm13559-201ENSMUST00000120476 863 ntBASIC19.15■□□□□ 0.66
Taf1Q80UV9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Taf1Q80UV9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Taf1Q80UV9 Gm9987-201ENSMUST00000069768 567 ntBASIC19.15■□□□□ 0.66
Taf1Q80UV9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Taf1Q80UV9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Taf1Q80UV9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Taf1Q80UV9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Taf1Q80UV9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Taf1Q80UV9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Taf1Q80UV9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Taf1Q80UV9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Taf1Q80UV9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Taf1Q80UV9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Taf1Q80UV9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Taf1Q80UV9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.14■□□□□ 0.65
Taf1Q80UV9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.14■□□□□ 0.65
Taf1Q80UV9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Taf1Q80UV9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.14■□□□□ 0.65
Taf1Q80UV9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Taf1Q80UV9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.14■□□□□ 0.65
Taf1Q80UV9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Taf1Q80UV9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Taf1Q80UV9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Taf1Q80UV9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Taf1Q80UV9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Taf1Q80UV9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Taf1Q80UV9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Taf1Q80UV9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Taf1Q80UV9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Taf1Q80UV9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms