Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pif1Q80SX8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.46■□□□□ 0.23
Pif1Q80SX8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pif1Q80SX8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pif1Q80SX8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pif1Q80SX8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pif1Q80SX8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pif1Q80SX8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pif1Q80SX8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
Pif1Q80SX8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pif1Q80SX8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pif1Q80SX8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pif1Q80SX8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pif1Q80SX8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pif1Q80SX8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pif1Q80SX8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pif1Q80SX8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pif1Q80SX8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Pif1Q80SX8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.45■□□□□ 0.22
Pif1Q80SX8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pif1Q80SX8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pif1Q80SX8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pif1Q80SX8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pif1Q80SX8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Pif1Q80SX8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pif1Q80SX8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pif1Q80SX8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pif1Q80SX8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pif1Q80SX8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pif1Q80SX8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pif1Q80SX8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pif1Q80SX8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pif1Q80SX8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pif1Q80SX8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pif1Q80SX8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pif1Q80SX8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pif1Q80SX8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pif1Q80SX8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pif1Q80SX8 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.44■□□□□ 0.22
Pif1Q80SX8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pif1Q80SX8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pif1Q80SX8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pif1Q80SX8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pif1Q80SX8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pif1Q80SX8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.44■□□□□ 0.22
Pif1Q80SX8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pif1Q80SX8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Pif1Q80SX8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pif1Q80SX8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pif1Q80SX8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pif1Q80SX8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pif1Q80SX8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pif1Q80SX8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pif1Q80SX8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pif1Q80SX8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Pif1Q80SX8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pif1Q80SX8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pif1Q80SX8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pif1Q80SX8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pif1Q80SX8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pif1Q80SX8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pif1Q80SX8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.43■□□□□ 0.22
Pif1Q80SX8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pif1Q80SX8 Gm3375-201ENSMUST00000203929 796 ntBASIC16.43■□□□□ 0.22
Pif1Q80SX8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pif1Q80SX8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pif1Q80SX8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.43■□□□□ 0.22
Pif1Q80SX8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Pif1Q80SX8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pif1Q80SX8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pif1Q80SX8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pif1Q80SX8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pif1Q80SX8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pif1Q80SX8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pif1Q80SX8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pif1Q80SX8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Pif1Q80SX8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Pif1Q80SX8 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.42■□□□□ 0.22
Pif1Q80SX8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pif1Q80SX8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pif1Q80SX8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pif1Q80SX8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pif1Q80SX8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pif1Q80SX8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pif1Q80SX8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pif1Q80SX8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pif1Q80SX8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Pif1Q80SX8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pif1Q80SX8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pif1Q80SX8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pif1Q80SX8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pif1Q80SX8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pif1Q80SX8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pif1Q80SX8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pif1Q80SX8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.41■□□□□ 0.22
Pif1Q80SX8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pif1Q80SX8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pif1Q80SX8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pif1Q80SX8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pif1Q80SX8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms