Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 Idnk-204ENSMUST00000226010 1898 ntBASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.77■□□□□ 0.59
Lsm8Q6ZWM4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm8Q6ZWM4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm8Q6ZWM4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.76■□□□□ 0.59
Lsm8Q6ZWM4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.76■□□□□ 0.59
Lsm8Q6ZWM4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm8Q6ZWM4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm8Q6ZWM4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.76■□□□□ 0.59
Lsm8Q6ZWM4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm8Q6ZWM4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm8Q6ZWM4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.75■□□□□ 0.59
Lsm8Q6ZWM4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm8Q6ZWM4 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.75■□□□□ 0.59
Lsm8Q6ZWM4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Lsm8Q6ZWM4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm8Q6ZWM4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm8Q6ZWM4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm8Q6ZWM4 Rarb-207ENSMUST00000225921 2756 ntBASIC18.75■□□□□ 0.59
Lsm8Q6ZWM4 Gm10418-201ENSMUST00000100943 576 ntBASIC18.75■□□□□ 0.59
Lsm8Q6ZWM4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.75■□□□□ 0.59
Lsm8Q6ZWM4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm8Q6ZWM4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm8Q6ZWM4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm8Q6ZWM4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm8Q6ZWM4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm8Q6ZWM4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm8Q6ZWM4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm8Q6ZWM4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm8Q6ZWM4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Lsm8Q6ZWM4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Lsm8Q6ZWM4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm8Q6ZWM4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Lsm8Q6ZWM4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm8Q6ZWM4 Gm11249-201ENSMUST00000117071 859 ntBASIC18.74■□□□□ 0.59
Lsm8Q6ZWM4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Lsm8Q6ZWM4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.74■□□□□ 0.59
Lsm8Q6ZWM4 Gm20049-201ENSMUST00000219950 730 ntBASIC18.74■□□□□ 0.59
Lsm8Q6ZWM4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.74■□□□□ 0.59
Lsm8Q6ZWM4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm8Q6ZWM4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm8Q6ZWM4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm8Q6ZWM4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm8Q6ZWM4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.74■□□□□ 0.59
Lsm8Q6ZWM4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm8Q6ZWM4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm8Q6ZWM4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm8Q6ZWM4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm8Q6ZWM4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm8Q6ZWM4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm8Q6ZWM4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm8Q6ZWM4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Lsm8Q6ZWM4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm8Q6ZWM4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm8Q6ZWM4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm8Q6ZWM4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm8Q6ZWM4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm8Q6ZWM4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.73■□□□□ 0.59
Lsm8Q6ZWM4 Gm10138-203ENSMUST00000206952 366 ntBASIC18.73■□□□□ 0.59
Lsm8Q6ZWM4 Gm29791-202ENSMUST00000207888 369 ntBASIC18.73■□□□□ 0.59
Lsm8Q6ZWM4 Mtag2-201ENSMUST00000058665 714 ntBASIC18.73■□□□□ 0.59
Lsm8Q6ZWM4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm8Q6ZWM4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm8Q6ZWM4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm8Q6ZWM4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.72■□□□□ 0.59
Lsm8Q6ZWM4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm8Q6ZWM4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm8Q6ZWM4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm8Q6ZWM4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Lsm8Q6ZWM4 Mir6349-201ENSMUST00000184059 97 ntBASIC18.72■□□□□ 0.59
Lsm8Q6ZWM4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.72■□□□□ 0.59
Lsm8Q6ZWM4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm8Q6ZWM4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm8Q6ZWM4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm8Q6ZWM4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm8Q6ZWM4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm8Q6ZWM4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm8Q6ZWM4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.71■□□□□ 0.59
Lsm8Q6ZWM4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm8Q6ZWM4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.71■□□□□ 0.59
Lsm8Q6ZWM4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.71■□□□□ 0.59
Lsm8Q6ZWM4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm8Q6ZWM4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm8Q6ZWM4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm8Q6ZWM4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
Lsm8Q6ZWM4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Lsm8Q6ZWM4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm8Q6ZWM4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm8Q6ZWM4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm8Q6ZWM4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm8Q6ZWM4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm8Q6ZWM4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm8Q6ZWM4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm8Q6ZWM4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms