Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ssx9Q6XAS3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Ssx9Q6XAS3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ssx9Q6XAS3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ssx9Q6XAS3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ssx9Q6XAS3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ssx9Q6XAS3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ssx9Q6XAS3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssx9Q6XAS3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssx9Q6XAS3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssx9Q6XAS3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssx9Q6XAS3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssx9Q6XAS3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssx9Q6XAS3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssx9Q6XAS3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssx9Q6XAS3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ssx9Q6XAS3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssx9Q6XAS3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ssx9Q6XAS3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssx9Q6XAS3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ssx9Q6XAS3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssx9Q6XAS3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssx9Q6XAS3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssx9Q6XAS3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ssx9Q6XAS3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssx9Q6XAS3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ssx9Q6XAS3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssx9Q6XAS3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssx9Q6XAS3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ssx9Q6XAS3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ssx9Q6XAS3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.78■□□□□ 0.44
Ssx9Q6XAS3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssx9Q6XAS3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssx9Q6XAS3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ssx9Q6XAS3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssx9Q6XAS3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssx9Q6XAS3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 Gm8969-201ENSMUST00000199694 526 ntBASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ssx9Q6XAS3 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.77■□□□□ 0.43
Ssx9Q6XAS3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ssx9Q6XAS3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Ssx9Q6XAS3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx9Q6XAS3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx9Q6XAS3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx9Q6XAS3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.76■□□□□ 0.43
Ssx9Q6XAS3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.76■□□□□ 0.43
Ssx9Q6XAS3 Idnk-204ENSMUST00000226010 1898 ntBASIC17.76■□□□□ 0.43
Ssx9Q6XAS3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.76■□□□□ 0.43
Ssx9Q6XAS3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ssx9Q6XAS3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.76■□□□□ 0.43
Ssx9Q6XAS3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ssx9Q6XAS3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ssx9Q6XAS3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx9Q6XAS3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Ssx9Q6XAS3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx9Q6XAS3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx9Q6XAS3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ssx9Q6XAS3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx9Q6XAS3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx9Q6XAS3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx9Q6XAS3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx9Q6XAS3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx9Q6XAS3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Ssx9Q6XAS3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx9Q6XAS3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Ssx9Q6XAS3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx9Q6XAS3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx9Q6XAS3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx9Q6XAS3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx9Q6XAS3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx9Q6XAS3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx9Q6XAS3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx9Q6XAS3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx9Q6XAS3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx9Q6XAS3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx9Q6XAS3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx9Q6XAS3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx9Q6XAS3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx9Q6XAS3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms