Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Npc1l1Q6T3U4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Npc1l1Q6T3U4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Npc1l1Q6T3U4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Npc1l1Q6T3U4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Npc1l1Q6T3U4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Npc1l1Q6T3U4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Npc1l1Q6T3U4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.47■■□□□ 1.03
Npc1l1Q6T3U4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Npc1l1Q6T3U4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Npc1l1Q6T3U4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Npc1l1Q6T3U4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Npc1l1Q6T3U4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.47■■□□□ 1.03
Npc1l1Q6T3U4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Npc1l1Q6T3U4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Npc1l1Q6T3U4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Npc1l1Q6T3U4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Npc1l1Q6T3U4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Npc1l1Q6T3U4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Npc1l1Q6T3U4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Npc1l1Q6T3U4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Npc1l1Q6T3U4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.46■■□□□ 1.03
Npc1l1Q6T3U4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.46■■□□□ 1.03
Npc1l1Q6T3U4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Npc1l1Q6T3U4 Gm37292-201ENSMUST00000192062 758 ntBASIC21.46■■□□□ 1.03
Npc1l1Q6T3U4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC21.46■■□□□ 1.03
Npc1l1Q6T3U4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Npc1l1Q6T3U4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Npc1l1Q6T3U4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Npc1l1Q6T3U4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Npc1l1Q6T3U4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Npc1l1Q6T3U4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Npc1l1Q6T3U4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.45■■□□□ 1.02
Npc1l1Q6T3U4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Npc1l1Q6T3U4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Npc1l1Q6T3U4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Npc1l1Q6T3U4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.45■■□□□ 1.02
Npc1l1Q6T3U4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Npc1l1Q6T3U4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Npc1l1Q6T3U4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Npc1l1Q6T3U4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Npc1l1Q6T3U4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.45■■□□□ 1.02
Npc1l1Q6T3U4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Npc1l1Q6T3U4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 Gm42545-201ENSMUST00000202755 922 ntBASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 Gm21814-202ENSMUST00000203277 873 ntBASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Npc1l1Q6T3U4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Npc1l1Q6T3U4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.43■■□□□ 1.02
Npc1l1Q6T3U4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Npc1l1Q6T3U4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Npc1l1Q6T3U4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Npc1l1Q6T3U4 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.43■■□□□ 1.02
Npc1l1Q6T3U4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Npc1l1Q6T3U4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Npc1l1Q6T3U4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Npc1l1Q6T3U4 AC166341.7-201ENSMUST00000221698 126 ntBASIC21.43■■□□□ 1.02
Npc1l1Q6T3U4 Fst-202ENSMUST00000223640 2612 ntBASIC21.43■■□□□ 1.02
Npc1l1Q6T3U4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Npc1l1Q6T3U4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Npc1l1Q6T3U4 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.43■■□□□ 1.02
Npc1l1Q6T3U4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Npc1l1Q6T3U4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Npc1l1Q6T3U4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Npc1l1Q6T3U4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Npc1l1Q6T3U4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Npc1l1Q6T3U4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Npc1l1Q6T3U4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Npc1l1Q6T3U4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Npc1l1Q6T3U4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Npc1l1Q6T3U4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Npc1l1Q6T3U4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.42■■□□□ 1.02
Npc1l1Q6T3U4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.42■■□□□ 1.02
Npc1l1Q6T3U4 Gm16042-201ENSMUST00000204813 1247 ntBASIC21.42■■□□□ 1.02
Npc1l1Q6T3U4 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.42■■□□□ 1.02
Npc1l1Q6T3U4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Npc1l1Q6T3U4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.42■■□□□ 1.02
Npc1l1Q6T3U4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Npc1l1Q6T3U4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Npc1l1Q6T3U4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Npc1l1Q6T3U4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms