Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC22.15■■□□□ 1.14
Ddx58Q6Q899 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx58Q6Q899 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx58Q6Q899 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC22.15■■□□□ 1.14
Ddx58Q6Q899 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx58Q6Q899 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Ddx58Q6Q899 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ddx58Q6Q899 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ddx58Q6Q899 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC22.14■■□□□ 1.13
Ddx58Q6Q899 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC22.14■■□□□ 1.13
Ddx58Q6Q899 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ddx58Q6Q899 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ddx58Q6Q899 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC22.14■■□□□ 1.13
Ddx58Q6Q899 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx58Q6Q899 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Ddx58Q6Q899 Gm6433-201ENSMUST00000118634 875 ntBASIC22.13■■□□□ 1.13
Ddx58Q6Q899 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx58Q6Q899 Gm9987-201ENSMUST00000069768 567 ntBASIC22.13■■□□□ 1.13
Ddx58Q6Q899 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx58Q6Q899 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
Ddx58Q6Q899 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx58Q6Q899 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Ddx58Q6Q899 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx58Q6Q899 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx58Q6Q899 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx58Q6Q899 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx58Q6Q899 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx58Q6Q899 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC22.12■■□□□ 1.13
Ddx58Q6Q899 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC22.12■■□□□ 1.13
Ddx58Q6Q899 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx58Q6Q899 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx58Q6Q899 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx58Q6Q899 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC22.12■■□□□ 1.13
Ddx58Q6Q899 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Ddx58Q6Q899 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Ddx58Q6Q899 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx58Q6Q899 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx58Q6Q899 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx58Q6Q899 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
Ddx58Q6Q899 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC22.11■■□□□ 1.13
Ddx58Q6Q899 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx58Q6Q899 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx58Q6Q899 Gm37820-201ENSMUST00000194021 2147 ntBASIC22.11■■□□□ 1.13
Ddx58Q6Q899 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx58Q6Q899 Gm4974-201ENSMUST00000209974 875 ntBASIC22.11■■□□□ 1.13
Ddx58Q6Q899 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx58Q6Q899 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx58Q6Q899 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
Ddx58Q6Q899 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Ddx58Q6Q899 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Ddx58Q6Q899 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx58Q6Q899 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx58Q6Q899 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx58Q6Q899 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Ddx58Q6Q899 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC22.1■■□□□ 1.13
Ddx58Q6Q899 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC22.1■■□□□ 1.13
Ddx58Q6Q899 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC22.1■■□□□ 1.13
Ddx58Q6Q899 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx58Q6Q899 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx58Q6Q899 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx58Q6Q899 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Ddx58Q6Q899 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx58Q6Q899 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Ddx58Q6Q899 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC22.1■■□□□ 1.13
Ddx58Q6Q899 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx58Q6Q899 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx58Q6Q899 Gm13559-201ENSMUST00000120476 863 ntBASIC22.09■■□□□ 1.13
Ddx58Q6Q899 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC22.09■■□□□ 1.13
Ddx58Q6Q899 Gm7977-201ENSMUST00000193787 748 ntBASIC22.09■■□□□ 1.13
Ddx58Q6Q899 Gm29791-202ENSMUST00000207888 369 ntBASIC22.09■■□□□ 1.13
Ddx58Q6Q899 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx58Q6Q899 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx58Q6Q899 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx58Q6Q899 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx58Q6Q899 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx58Q6Q899 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx58Q6Q899 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx58Q6Q899 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx58Q6Q899 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx58Q6Q899 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx58Q6Q899 Gm13401-201ENSMUST00000117074 291 ntBASIC22.08■■□□□ 1.13
Ddx58Q6Q899 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC22.08■■□□□ 1.13
Ddx58Q6Q899 Gm12085-201ENSMUST00000119263 940 ntBASIC22.08■■□□□ 1.13
Ddx58Q6Q899 Gm11539-201ENSMUST00000119837 557 ntBASIC22.08■■□□□ 1.13
Ddx58Q6Q899 Gm13436-201ENSMUST00000120418 567 ntBASIC22.08■■□□□ 1.13
Ddx58Q6Q899 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Ddx58Q6Q899 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ddx58Q6Q899 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ddx58Q6Q899 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Ddx58Q6Q899 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx58Q6Q899 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Ddx58Q6Q899 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx58Q6Q899 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx58Q6Q899 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx58Q6Q899 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC22.07■■□□□ 1.12
Ddx58Q6Q899 Gm8668-201ENSMUST00000120559 1447 ntBASIC22.07■■□□□ 1.12
Ddx58Q6Q899 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx58Q6Q899 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx58Q6Q899 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx58Q6Q899 Gm9694-201ENSMUST00000193347 1189 ntBASIC22.07■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms