Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.67■□□□□ 0.42
Scaf4Q6PFF0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf4Q6PFF0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf4Q6PFF0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf4Q6PFF0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.67■□□□□ 0.42
Scaf4Q6PFF0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf4Q6PFF0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf4Q6PFF0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf4Q6PFF0 Reep4-203ENSMUST00000226563 1444 ntBASIC17.67■□□□□ 0.42
Scaf4Q6PFF0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf4Q6PFF0 Gm45417-201ENSMUST00000209533 758 ntBASIC17.67■□□□□ 0.42
Scaf4Q6PFF0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf4Q6PFF0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf4Q6PFF0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf4Q6PFF0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf4Q6PFF0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf4Q6PFF0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf4Q6PFF0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf4Q6PFF0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Scaf4Q6PFF0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.67■□□□□ 0.42
Scaf4Q6PFF0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf4Q6PFF0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf4Q6PFF0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf4Q6PFF0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf4Q6PFF0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf4Q6PFF0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf4Q6PFF0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.66■□□□□ 0.42
Scaf4Q6PFF0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Scaf4Q6PFF0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf4Q6PFF0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Scaf4Q6PFF0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf4Q6PFF0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf4Q6PFF0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Scaf4Q6PFF0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scaf4Q6PFF0 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.65■□□□□ 0.42
Scaf4Q6PFF0 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.65■□□□□ 0.42
Scaf4Q6PFF0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scaf4Q6PFF0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scaf4Q6PFF0 Gm9988-201ENSMUST00000069786 435 ntBASIC17.65■□□□□ 0.42
Scaf4Q6PFF0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scaf4Q6PFF0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scaf4Q6PFF0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scaf4Q6PFF0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scaf4Q6PFF0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scaf4Q6PFF0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.65■□□□□ 0.42
Scaf4Q6PFF0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scaf4Q6PFF0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
Scaf4Q6PFF0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.64■□□□□ 0.41
Scaf4Q6PFF0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scaf4Q6PFF0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scaf4Q6PFF0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scaf4Q6PFF0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scaf4Q6PFF0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scaf4Q6PFF0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scaf4Q6PFF0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Scaf4Q6PFF0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scaf4Q6PFF0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scaf4Q6PFF0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scaf4Q6PFF0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scaf4Q6PFF0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scaf4Q6PFF0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scaf4Q6PFF0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.64■□□□□ 0.41
Scaf4Q6PFF0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scaf4Q6PFF0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
Scaf4Q6PFF0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scaf4Q6PFF0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Scaf4Q6PFF0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scaf4Q6PFF0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scaf4Q6PFF0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf4Q6PFF0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf4Q6PFF0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Scaf4Q6PFF0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.63■□□□□ 0.41
Scaf4Q6PFF0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Scaf4Q6PFF0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.63■□□□□ 0.41
Scaf4Q6PFF0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf4Q6PFF0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf4Q6PFF0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.63■□□□□ 0.41
Scaf4Q6PFF0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf4Q6PFF0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf4Q6PFF0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf4Q6PFF0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf4Q6PFF0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf4Q6PFF0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Scaf4Q6PFF0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Scaf4Q6PFF0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Scaf4Q6PFF0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf4Q6PFF0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf4Q6PFF0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf4Q6PFF0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Scaf4Q6PFF0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Scaf4Q6PFF0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.62■□□□□ 0.41
Scaf4Q6PFF0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf4Q6PFF0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Scaf4Q6PFF0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.62■□□□□ 0.41
Scaf4Q6PFF0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Scaf4Q6PFF0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.62■□□□□ 0.41
Scaf4Q6PFF0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf4Q6PFF0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf4Q6PFF0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.62■□□□□ 0.41
Scaf4Q6PFF0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms