Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cachd1Q6PDJ1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cachd1Q6PDJ1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Cachd1Q6PDJ1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cachd1Q6PDJ1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cachd1Q6PDJ1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cachd1Q6PDJ1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cachd1Q6PDJ1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cachd1Q6PDJ1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cachd1Q6PDJ1 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.03■□□□□ 0.48
Cachd1Q6PDJ1 Gm21559-201ENSMUST00000220638 855 ntBASIC18.03■□□□□ 0.48
Cachd1Q6PDJ1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cachd1Q6PDJ1 Mtag2-201ENSMUST00000058665 714 ntBASIC18.03■□□□□ 0.48
Cachd1Q6PDJ1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cachd1Q6PDJ1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cachd1Q6PDJ1 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cachd1Q6PDJ1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Cachd1Q6PDJ1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cachd1Q6PDJ1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cachd1Q6PDJ1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.03■□□□□ 0.48
Cachd1Q6PDJ1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cachd1Q6PDJ1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cachd1Q6PDJ1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cachd1Q6PDJ1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cachd1Q6PDJ1 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cachd1Q6PDJ1 Gm27459-201ENSMUST00000184860 107 ntBASIC18.02■□□□□ 0.48
Cachd1Q6PDJ1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.02■□□□□ 0.48
Cachd1Q6PDJ1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Cachd1Q6PDJ1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cachd1Q6PDJ1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.02■□□□□ 0.48
Cachd1Q6PDJ1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cachd1Q6PDJ1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cachd1Q6PDJ1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cachd1Q6PDJ1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.01■□□□□ 0.47
Cachd1Q6PDJ1 Gm16061-201ENSMUST00000122167 857 ntBASIC18.01■□□□□ 0.47
Cachd1Q6PDJ1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cachd1Q6PDJ1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cachd1Q6PDJ1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.01■□□□□ 0.47
Cachd1Q6PDJ1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cachd1Q6PDJ1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Cachd1Q6PDJ1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cachd1Q6PDJ1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cachd1Q6PDJ1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Cachd1Q6PDJ1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cachd1Q6PDJ1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Cachd1Q6PDJ1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cachd1Q6PDJ1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cachd1Q6PDJ1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cachd1Q6PDJ1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18■□□□□ 0.47
Cachd1Q6PDJ1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cachd1Q6PDJ1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cachd1Q6PDJ1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cachd1Q6PDJ1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cachd1Q6PDJ1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cachd1Q6PDJ1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18■□□□□ 0.47
Cachd1Q6PDJ1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cachd1Q6PDJ1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18■□□□□ 0.47
Cachd1Q6PDJ1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Cachd1Q6PDJ1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cachd1Q6PDJ1 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Cachd1Q6PDJ1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cachd1Q6PDJ1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cachd1Q6PDJ1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cachd1Q6PDJ1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18■□□□□ 0.47
Cachd1Q6PDJ1 Gm45560-201ENSMUST00000211492 1472 ntBASIC18■□□□□ 0.47
Cachd1Q6PDJ1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18■□□□□ 0.47
Cachd1Q6PDJ1 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Cachd1Q6PDJ1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cachd1Q6PDJ1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Cachd1Q6PDJ1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cachd1Q6PDJ1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cachd1Q6PDJ1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cachd1Q6PDJ1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cachd1Q6PDJ1 Gm8097-201ENSMUST00000117903 829 ntBASIC17.99■□□□□ 0.47
Cachd1Q6PDJ1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.99■□□□□ 0.47
Cachd1Q6PDJ1 Gm43575-201ENSMUST00000196420 516 ntBASIC17.99■□□□□ 0.47
Cachd1Q6PDJ1 Gm43347-201ENSMUST00000200226 580 ntBASIC17.99■□□□□ 0.47
Cachd1Q6PDJ1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cachd1Q6PDJ1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cachd1Q6PDJ1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cachd1Q6PDJ1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cachd1Q6PDJ1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cachd1Q6PDJ1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cachd1Q6PDJ1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cachd1Q6PDJ1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cachd1Q6PDJ1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cachd1Q6PDJ1 Golph3-202ENSMUST00000226517 2359 ntBASIC17.98■□□□□ 0.47
Cachd1Q6PDJ1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cachd1Q6PDJ1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cachd1Q6PDJ1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cachd1Q6PDJ1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cachd1Q6PDJ1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cachd1Q6PDJ1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cachd1Q6PDJ1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cachd1Q6PDJ1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Cachd1Q6PDJ1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.98■□□□□ 0.47
Cachd1Q6PDJ1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cachd1Q6PDJ1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cachd1Q6PDJ1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cachd1Q6PDJ1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms