Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Smarcc2Q6PDG5 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Smarcc2Q6PDG5 Gm37856-201ENSMUST00000191634 999 ntBASIC20.86■□□□□ 0.93
Smarcc2Q6PDG5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcc2Q6PDG5 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcc2Q6PDG5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcc2Q6PDG5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcc2Q6PDG5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcc2Q6PDG5 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.85■□□□□ 0.93
Smarcc2Q6PDG5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.85■□□□□ 0.93
Smarcc2Q6PDG5 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.85■□□□□ 0.93
Smarcc2Q6PDG5 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcc2Q6PDG5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcc2Q6PDG5 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcc2Q6PDG5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.84■□□□□ 0.93
Smarcc2Q6PDG5 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc2Q6PDG5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc2Q6PDG5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.84■□□□□ 0.93
Smarcc2Q6PDG5 Trmt13-210ENSMUST00000198454 880 ntBASIC20.84■□□□□ 0.93
Smarcc2Q6PDG5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
Smarcc2Q6PDG5 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc2Q6PDG5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.84■□□□□ 0.93
Smarcc2Q6PDG5 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc2Q6PDG5 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcc2Q6PDG5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.83■□□□□ 0.93
Smarcc2Q6PDG5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcc2Q6PDG5 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.83■□□□□ 0.93
Smarcc2Q6PDG5 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcc2Q6PDG5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcc2Q6PDG5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smarcc2Q6PDG5 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smarcc2Q6PDG5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.83■□□□□ 0.92
Smarcc2Q6PDG5 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smarcc2Q6PDG5 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Smarcc2Q6PDG5 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smarcc2Q6PDG5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc2Q6PDG5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc2Q6PDG5 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc2Q6PDG5 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc2Q6PDG5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc2Q6PDG5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc2Q6PDG5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.82■□□□□ 0.92
Smarcc2Q6PDG5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc2Q6PDG5 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc2Q6PDG5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc2Q6PDG5 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc2Q6PDG5 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc2Q6PDG5 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc2Q6PDG5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc2Q6PDG5 Gm27275-201ENSMUST00000184318 272 ntBASIC20.82■□□□□ 0.92
Smarcc2Q6PDG5 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Smarcc2Q6PDG5 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Smarcc2Q6PDG5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.82■□□□□ 0.92
Smarcc2Q6PDG5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc2Q6PDG5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcc2Q6PDG5 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.81■□□□□ 0.92
Smarcc2Q6PDG5 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Smarcc2Q6PDG5 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Smarcc2Q6PDG5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.81■□□□□ 0.92
Smarcc2Q6PDG5 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcc2Q6PDG5 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcc2Q6PDG5 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcc2Q6PDG5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcc2Q6PDG5 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcc2Q6PDG5 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.81■□□□□ 0.92
Smarcc2Q6PDG5 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcc2Q6PDG5 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcc2Q6PDG5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcc2Q6PDG5 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcc2Q6PDG5 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcc2Q6PDG5 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.8■□□□□ 0.92
Smarcc2Q6PDG5 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcc2Q6PDG5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
Smarcc2Q6PDG5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Smarcc2Q6PDG5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcc2Q6PDG5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Smarcc2Q6PDG5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.79■□□□□ 0.92
Smarcc2Q6PDG5 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcc2Q6PDG5 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.79■□□□□ 0.92
Smarcc2Q6PDG5 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcc2Q6PDG5 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.79■□□□□ 0.92
Smarcc2Q6PDG5 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.79■□□□□ 0.92
Smarcc2Q6PDG5 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.79■□□□□ 0.92
Smarcc2Q6PDG5 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcc2Q6PDG5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcc2Q6PDG5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcc2Q6PDG5 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcc2Q6PDG5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc2Q6PDG5 Dio3-201ENSMUST00000097228 1449 ntBASIC20.78■□□□□ 0.92
Smarcc2Q6PDG5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc2Q6PDG5 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc2Q6PDG5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc2Q6PDG5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc2Q6PDG5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc2Q6PDG5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc2Q6PDG5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc2Q6PDG5 Gm2399-201ENSMUST00000104944 225 ntBASIC20.78■□□□□ 0.92
Smarcc2Q6PDG5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc2Q6PDG5 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.78■□□□□ 0.92
Smarcc2Q6PDG5 Gm38285-201ENSMUST00000192928 922 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms