Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd3Q6P9Z1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd3Q6P9Z1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Smarcd3Q6P9Z1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Smarcd3Q6P9Z1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd3Q6P9Z1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd3Q6P9Z1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Smarcd3Q6P9Z1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd3Q6P9Z1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd3Q6P9Z1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd3Q6P9Z1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd3Q6P9Z1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd3Q6P9Z1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd3Q6P9Z1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.41■□□□□ 0.22
Smarcd3Q6P9Z1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.41■□□□□ 0.22
Smarcd3Q6P9Z1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd3Q6P9Z1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd3Q6P9Z1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Smarcd3Q6P9Z1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd3Q6P9Z1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd3Q6P9Z1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd3Q6P9Z1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.4■□□□□ 0.22
Smarcd3Q6P9Z1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd3Q6P9Z1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd3Q6P9Z1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd3Q6P9Z1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd3Q6P9Z1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Smarcd3Q6P9Z1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Smarcd3Q6P9Z1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Smarcd3Q6P9Z1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Smarcd3Q6P9Z1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
Smarcd3Q6P9Z1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd3Q6P9Z1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd3Q6P9Z1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd3Q6P9Z1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd3Q6P9Z1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Smarcd3Q6P9Z1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.4■□□□□ 0.22
Smarcd3Q6P9Z1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.4■□□□□ 0.22
Smarcd3Q6P9Z1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Smarcd3Q6P9Z1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Smarcd3Q6P9Z1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd3Q6P9Z1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd3Q6P9Z1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd3Q6P9Z1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd3Q6P9Z1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd3Q6P9Z1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd3Q6P9Z1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd3Q6P9Z1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd3Q6P9Z1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd3Q6P9Z1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd3Q6P9Z1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Smarcd3Q6P9Z1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd3Q6P9Z1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd3Q6P9Z1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd3Q6P9Z1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd3Q6P9Z1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd3Q6P9Z1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.38■□□□□ 0.21
Smarcd3Q6P9Z1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.38■□□□□ 0.21
Smarcd3Q6P9Z1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd3Q6P9Z1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Smarcd3Q6P9Z1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd3Q6P9Z1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.38■□□□□ 0.21
Smarcd3Q6P9Z1 Gm42778-201ENSMUST00000199644 553 ntBASIC16.38■□□□□ 0.21
Smarcd3Q6P9Z1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd3Q6P9Z1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Smarcd3Q6P9Z1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.38■□□□□ 0.21
Smarcd3Q6P9Z1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd3Q6P9Z1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd3Q6P9Z1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd3Q6P9Z1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd3Q6P9Z1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.38■□□□□ 0.21
Smarcd3Q6P9Z1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd3Q6P9Z1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.38■□□□□ 0.21
Smarcd3Q6P9Z1 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.38■□□□□ 0.21
Smarcd3Q6P9Z1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd3Q6P9Z1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd3Q6P9Z1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd3Q6P9Z1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd3Q6P9Z1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd3Q6P9Z1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd3Q6P9Z1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Smarcd3Q6P9Z1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Smarcd3Q6P9Z1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.37■□□□□ 0.21
Smarcd3Q6P9Z1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd3Q6P9Z1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.37■□□□□ 0.21
Smarcd3Q6P9Z1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd3Q6P9Z1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd3Q6P9Z1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd3Q6P9Z1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd3Q6P9Z1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd3Q6P9Z1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Smarcd3Q6P9Z1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd3Q6P9Z1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd3Q6P9Z1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcd3Q6P9Z1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcd3Q6P9Z1 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.36■□□□□ 0.21
Smarcd3Q6P9Z1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.36■□□□□ 0.21
Smarcd3Q6P9Z1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcd3Q6P9Z1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcd3Q6P9Z1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms