Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smchd1Q6P5D8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smchd1Q6P5D8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smchd1Q6P5D8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smchd1Q6P5D8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smchd1Q6P5D8 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.72■□□□□ 0.75
Smchd1Q6P5D8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smchd1Q6P5D8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smchd1Q6P5D8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smchd1Q6P5D8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smchd1Q6P5D8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smchd1Q6P5D8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smchd1Q6P5D8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smchd1Q6P5D8 Gm7889-201ENSMUST00000185591 958 ntBASIC19.71■□□□□ 0.75
Smchd1Q6P5D8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.71■□□□□ 0.75
Smchd1Q6P5D8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.71■□□□□ 0.75
Smchd1Q6P5D8 Odf3b-204ENSMUST00000227834 930 ntBASIC19.71■□□□□ 0.75
Smchd1Q6P5D8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smchd1Q6P5D8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.71■□□□□ 0.75
Smchd1Q6P5D8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smchd1Q6P5D8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Smchd1Q6P5D8 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.71■□□□□ 0.75
Smchd1Q6P5D8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smchd1Q6P5D8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smchd1Q6P5D8 Gm11643-201ENSMUST00000119578 864 ntBASIC19.71■□□□□ 0.75
Smchd1Q6P5D8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Smchd1Q6P5D8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smchd1Q6P5D8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smchd1Q6P5D8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.7■□□□□ 0.74
Smchd1Q6P5D8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.7■□□□□ 0.74
Smchd1Q6P5D8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smchd1Q6P5D8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.7■□□□□ 0.74
Smchd1Q6P5D8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Smchd1Q6P5D8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smchd1Q6P5D8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smchd1Q6P5D8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Smchd1Q6P5D8 Gm13559-201ENSMUST00000120476 863 ntBASIC19.69■□□□□ 0.74
Smchd1Q6P5D8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Smchd1Q6P5D8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Smchd1Q6P5D8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smchd1Q6P5D8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Smchd1Q6P5D8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smchd1Q6P5D8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smchd1Q6P5D8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Smchd1Q6P5D8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.69■□□□□ 0.74
Smchd1Q6P5D8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smchd1Q6P5D8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smchd1Q6P5D8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smchd1Q6P5D8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Smchd1Q6P5D8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Smchd1Q6P5D8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smchd1Q6P5D8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smchd1Q6P5D8 Idnk-204ENSMUST00000226010 1898 ntBASIC19.69■□□□□ 0.74
Smchd1Q6P5D8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smchd1Q6P5D8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Smchd1Q6P5D8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.68■□□□□ 0.74
Smchd1Q6P5D8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.68■□□□□ 0.74
Smchd1Q6P5D8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smchd1Q6P5D8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smchd1Q6P5D8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smchd1Q6P5D8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smchd1Q6P5D8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smchd1Q6P5D8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Smchd1Q6P5D8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smchd1Q6P5D8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Smchd1Q6P5D8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smchd1Q6P5D8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.67■□□□□ 0.74
Smchd1Q6P5D8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smchd1Q6P5D8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smchd1Q6P5D8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smchd1Q6P5D8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smchd1Q6P5D8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smchd1Q6P5D8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smchd1Q6P5D8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smchd1Q6P5D8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smchd1Q6P5D8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smchd1Q6P5D8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Smchd1Q6P5D8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.66■□□□□ 0.74
Smchd1Q6P5D8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smchd1Q6P5D8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.66■□□□□ 0.74
Smchd1Q6P5D8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smchd1Q6P5D8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.66■□□□□ 0.74
Smchd1Q6P5D8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smchd1Q6P5D8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smchd1Q6P5D8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Smchd1Q6P5D8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smchd1Q6P5D8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smchd1Q6P5D8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Smchd1Q6P5D8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smchd1Q6P5D8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Smchd1Q6P5D8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Smchd1Q6P5D8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smchd1Q6P5D8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smchd1Q6P5D8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smchd1Q6P5D8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smchd1Q6P5D8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.65■□□□□ 0.74
Smchd1Q6P5D8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.65■□□□□ 0.74
Smchd1Q6P5D8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smchd1Q6P5D8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smchd1Q6P5D8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms