Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Dio3-201ENSMUST00000097228 1449 ntBASIC20.01■□□□□ 0.79
Hdac4Q6NZM9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.01■□□□□ 0.79
Hdac4Q6NZM9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Hdac4Q6NZM9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20■□□□□ 0.79
Hdac4Q6NZM9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hdac4Q6NZM9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Hdac4Q6NZM9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Hdac4Q6NZM9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Hdac4Q6NZM9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Hdac4Q6NZM9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Hdac4Q6NZM9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Hdac4Q6NZM9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hdac4Q6NZM9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hdac4Q6NZM9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hdac4Q6NZM9 Gm8969-201ENSMUST00000199694 526 ntBASIC20■□□□□ 0.79
Hdac4Q6NZM9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hdac4Q6NZM9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
Hdac4Q6NZM9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hdac4Q6NZM9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Hdac4Q6NZM9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Hdac4Q6NZM9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hdac4Q6NZM9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Hdac4Q6NZM9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20■□□□□ 0.79
Hdac4Q6NZM9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.99■□□□□ 0.79
Hdac4Q6NZM9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.99■□□□□ 0.79
Hdac4Q6NZM9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hdac4Q6NZM9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hdac4Q6NZM9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hdac4Q6NZM9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hdac4Q6NZM9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hdac4Q6NZM9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hdac4Q6NZM9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hdac4Q6NZM9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hdac4Q6NZM9 Mir2861-201ENSMUST00000175539 82 ntBASIC19.99■□□□□ 0.79
Hdac4Q6NZM9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Hdac4Q6NZM9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hdac4Q6NZM9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.99■□□□□ 0.79
Hdac4Q6NZM9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
Hdac4Q6NZM9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.99■□□□□ 0.79
Hdac4Q6NZM9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hdac4Q6NZM9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hdac4Q6NZM9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Hdac4Q6NZM9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hdac4Q6NZM9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hdac4Q6NZM9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hdac4Q6NZM9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hdac4Q6NZM9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hdac4Q6NZM9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hdac4Q6NZM9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hdac4Q6NZM9 Mtag2-201ENSMUST00000058665 714 ntBASIC19.98■□□□□ 0.79
Hdac4Q6NZM9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.98■□□□□ 0.79
Hdac4Q6NZM9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Hdac4Q6NZM9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hdac4Q6NZM9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hdac4Q6NZM9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Hdac4Q6NZM9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac4Q6NZM9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac4Q6NZM9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac4Q6NZM9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.97■□□□□ 0.79
Hdac4Q6NZM9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac4Q6NZM9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac4Q6NZM9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac4Q6NZM9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac4Q6NZM9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.97■□□□□ 0.79
Hdac4Q6NZM9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Hdac4Q6NZM9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac4Q6NZM9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac4Q6NZM9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac4Q6NZM9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac4Q6NZM9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac4Q6NZM9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac4Q6NZM9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac4Q6NZM9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac4Q6NZM9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac4Q6NZM9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac4Q6NZM9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.96■□□□□ 0.79
Hdac4Q6NZM9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac4Q6NZM9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac4Q6NZM9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac4Q6NZM9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Hdac4Q6NZM9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac4Q6NZM9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac4Q6NZM9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Hdac4Q6NZM9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac4Q6NZM9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac4Q6NZM9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.96■□□□□ 0.79
Hdac4Q6NZM9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac4Q6NZM9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.95■□□□□ 0.78
Hdac4Q6NZM9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.95■□□□□ 0.78
Hdac4Q6NZM9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac4Q6NZM9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac4Q6NZM9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Hdac4Q6NZM9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.95■□□□□ 0.78
Hdac4Q6NZM9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Hdac4Q6NZM9 Gm12896-201ENSMUST00000118430 226 ntBASIC19.95■□□□□ 0.78
Hdac4Q6NZM9 Gm29791-202ENSMUST00000207888 369 ntBASIC19.95■□□□□ 0.78
Hdac4Q6NZM9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac4Q6NZM9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac4Q6NZM9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac4Q6NZM9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms