Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Sp140Q6NSQ5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Sp140Q6NSQ5 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sp140Q6NSQ5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sp140Q6NSQ5 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.11■□□□□ 0.49
Sp140Q6NSQ5 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Sp140Q6NSQ5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sp140Q6NSQ5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sp140Q6NSQ5 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sp140Q6NSQ5 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sp140Q6NSQ5 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sp140Q6NSQ5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.11■□□□□ 0.49
Sp140Q6NSQ5 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sp140Q6NSQ5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Sp140Q6NSQ5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sp140Q6NSQ5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.11■□□□□ 0.49
Sp140Q6NSQ5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sp140Q6NSQ5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sp140Q6NSQ5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sp140Q6NSQ5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
Sp140Q6NSQ5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sp140Q6NSQ5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.1■□□□□ 0.49
Sp140Q6NSQ5 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.1■□□□□ 0.49
Sp140Q6NSQ5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sp140Q6NSQ5 Rab3c-203ENSMUST00000224180 967 ntBASIC18.1■□□□□ 0.49
Sp140Q6NSQ5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Sp140Q6NSQ5 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sp140Q6NSQ5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.1■□□□□ 0.49
Sp140Q6NSQ5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sp140Q6NSQ5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.1■□□□□ 0.49
Sp140Q6NSQ5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sp140Q6NSQ5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sp140Q6NSQ5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sp140Q6NSQ5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sp140Q6NSQ5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sp140Q6NSQ5 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.09■□□□□ 0.49
Sp140Q6NSQ5 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Sp140Q6NSQ5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.09■□□□□ 0.49
Sp140Q6NSQ5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sp140Q6NSQ5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sp140Q6NSQ5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Sp140Q6NSQ5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Sp140Q6NSQ5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.09■□□□□ 0.49
Sp140Q6NSQ5 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.09■□□□□ 0.49
Sp140Q6NSQ5 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Sp140Q6NSQ5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sp140Q6NSQ5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sp140Q6NSQ5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sp140Q6NSQ5 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sp140Q6NSQ5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sp140Q6NSQ5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sp140Q6NSQ5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sp140Q6NSQ5 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sp140Q6NSQ5 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.08■□□□□ 0.48
Sp140Q6NSQ5 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Sp140Q6NSQ5 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sp140Q6NSQ5 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.08■□□□□ 0.48
Sp140Q6NSQ5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sp140Q6NSQ5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sp140Q6NSQ5 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.08■□□□□ 0.48
Sp140Q6NSQ5 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 Gm12933-201ENSMUST00000120203 872 ntBASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 Gm38285-201ENSMUST00000192928 922 ntBASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms