Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Krt42Q6IFX2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.38■□□□□ 0.53
Krt42Q6IFX2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Krt42Q6IFX2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.38■□□□□ 0.53
Krt42Q6IFX2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krt42Q6IFX2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krt42Q6IFX2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krt42Q6IFX2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Krt42Q6IFX2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krt42Q6IFX2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt42Q6IFX2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt42Q6IFX2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.37■□□□□ 0.53
Krt42Q6IFX2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt42Q6IFX2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.37■□□□□ 0.53
Krt42Q6IFX2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.37■□□□□ 0.53
Krt42Q6IFX2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt42Q6IFX2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt42Q6IFX2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt42Q6IFX2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt42Q6IFX2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt42Q6IFX2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Krt42Q6IFX2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt42Q6IFX2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt42Q6IFX2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Krt42Q6IFX2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Krt42Q6IFX2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Krt42Q6IFX2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt42Q6IFX2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt42Q6IFX2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt42Q6IFX2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt42Q6IFX2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Krt42Q6IFX2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Krt42Q6IFX2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt42Q6IFX2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Krt42Q6IFX2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.36■□□□□ 0.53
Krt42Q6IFX2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.36■□□□□ 0.53
Krt42Q6IFX2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt42Q6IFX2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt42Q6IFX2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt42Q6IFX2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt42Q6IFX2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt42Q6IFX2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt42Q6IFX2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt42Q6IFX2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt42Q6IFX2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Krt42Q6IFX2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt42Q6IFX2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt42Q6IFX2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Krt42Q6IFX2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.35■□□□□ 0.53
Krt42Q6IFX2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Krt42Q6IFX2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.35■□□□□ 0.53
Krt42Q6IFX2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Krt42Q6IFX2 Gm45102-201ENSMUST00000207427 857 ntBASIC18.35■□□□□ 0.53
Krt42Q6IFX2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt42Q6IFX2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Krt42Q6IFX2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Krt42Q6IFX2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt42Q6IFX2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt42Q6IFX2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt42Q6IFX2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Krt42Q6IFX2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Krt42Q6IFX2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt42Q6IFX2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt42Q6IFX2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt42Q6IFX2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt42Q6IFX2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt42Q6IFX2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.34■□□□□ 0.53
Krt42Q6IFX2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Krt42Q6IFX2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.34■□□□□ 0.53
Krt42Q6IFX2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt42Q6IFX2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt42Q6IFX2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Krt42Q6IFX2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt42Q6IFX2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Krt42Q6IFX2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.34■□□□□ 0.53
Krt42Q6IFX2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt42Q6IFX2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt42Q6IFX2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Krt42Q6IFX2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.33■□□□□ 0.53
Krt42Q6IFX2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.33■□□□□ 0.53
Krt42Q6IFX2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Krt42Q6IFX2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Krt42Q6IFX2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt42Q6IFX2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Krt42Q6IFX2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt42Q6IFX2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt42Q6IFX2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt42Q6IFX2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt42Q6IFX2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Krt42Q6IFX2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Krt42Q6IFX2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krt42Q6IFX2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Krt42Q6IFX2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Krt42Q6IFX2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krt42Q6IFX2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Krt42Q6IFX2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Krt42Q6IFX2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.32■□□□□ 0.52
Krt42Q6IFX2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Krt42Q6IFX2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Krt42Q6IFX2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms