Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Smarca2Q6DIC0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
Smarca2Q6DIC0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC31.6■■■□□ 2.65
Smarca2Q6DIC0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Smarca2Q6DIC0 Mzt1-203ENSMUST00000227948 952 ntBASIC31.6■■■□□ 2.65
Smarca2Q6DIC0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC31.59■■■□□ 2.65
Smarca2Q6DIC0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Smarca2Q6DIC0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Smarca2Q6DIC0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC31.59■■■□□ 2.65
Smarca2Q6DIC0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Smarca2Q6DIC0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Smarca2Q6DIC0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
Smarca2Q6DIC0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Smarca2Q6DIC0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
Smarca2Q6DIC0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Smarca2Q6DIC0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Smarca2Q6DIC0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
Smarca2Q6DIC0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Smarca2Q6DIC0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC31.58■■■□□ 2.65
Smarca2Q6DIC0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC31.58■■■□□ 2.65
Smarca2Q6DIC0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Smarca2Q6DIC0 Gm5867-201ENSMUST00000063197 592 ntBASIC31.58■■■□□ 2.65
Smarca2Q6DIC0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Smarca2Q6DIC0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC31.58■■■□□ 2.65
Smarca2Q6DIC0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
Smarca2Q6DIC0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
Smarca2Q6DIC0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.65
Smarca2Q6DIC0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Smarca2Q6DIC0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Smarca2Q6DIC0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
Smarca2Q6DIC0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC31.57■■■□□ 2.64
Smarca2Q6DIC0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC31.57■■■□□ 2.64
Smarca2Q6DIC0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Smarca2Q6DIC0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Smarca2Q6DIC0 Gm18115-201ENSMUST00000221209 621 ntBASIC31.56■■■□□ 2.64
Smarca2Q6DIC0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Smarca2Q6DIC0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC31.56■■■□□ 2.64
Smarca2Q6DIC0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Smarca2Q6DIC0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Smarca2Q6DIC0 Spsb2-203ENSMUST00000112473 1322 ntBASIC31.56■■■□□ 2.64
Smarca2Q6DIC0 Gm24589-201ENSMUST00000116692 94 ntBASIC31.56■■■□□ 2.64
Smarca2Q6DIC0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Smarca2Q6DIC0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Smarca2Q6DIC0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Smarca2Q6DIC0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
Smarca2Q6DIC0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Smarca2Q6DIC0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Smarca2Q6DIC0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Smarca2Q6DIC0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Smarca2Q6DIC0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Smarca2Q6DIC0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
Smarca2Q6DIC0 Gm37025-201ENSMUST00000195159 829 ntBASIC31.55■■■□□ 2.64
Smarca2Q6DIC0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Smarca2Q6DIC0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Smarca2Q6DIC0 Gm18958-201ENSMUST00000174258 762 ntBASIC31.54■■■□□ 2.64
Smarca2Q6DIC0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Smarca2Q6DIC0 Gm27389-201ENSMUST00000183622 195 ntBASIC31.54■■■□□ 2.64
Smarca2Q6DIC0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Smarca2Q6DIC0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Smarca2Q6DIC0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Smarca2Q6DIC0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
Smarca2Q6DIC0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC31.53■■■□□ 2.64
Smarca2Q6DIC0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC31.53■■■□□ 2.64
Smarca2Q6DIC0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Smarca2Q6DIC0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Smarca2Q6DIC0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Smarca2Q6DIC0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC31.53■■■□□ 2.64
Smarca2Q6DIC0 Gm42922-201ENSMUST00000195887 2078 ntBASIC31.53■■■□□ 2.64
Smarca2Q6DIC0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Smarca2Q6DIC0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Smarca2Q6DIC0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Smarca2Q6DIC0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC31.52■■■□□ 2.64
Smarca2Q6DIC0 Gm43514-201ENSMUST00000198852 424 ntBASIC31.52■■■□□ 2.64
Smarca2Q6DIC0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC31.52■■■□□ 2.64
Smarca2Q6DIC0 AW822252-206ENSMUST00000208904 237 ntBASIC31.52■■■□□ 2.64
Smarca2Q6DIC0 AC164629.2-201ENSMUST00000217916 270 ntBASIC31.52■■■□□ 2.64
Smarca2Q6DIC0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Smarca2Q6DIC0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Smarca2Q6DIC0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Smarca2Q6DIC0 Gm11950-201ENSMUST00000121615 838 ntBASIC31.51■■■□□ 2.64
Smarca2Q6DIC0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC31.51■■■□□ 2.64
Smarca2Q6DIC0 Gm34391-201ENSMUST00000203706 907 ntBASIC31.51■■■□□ 2.64
Smarca2Q6DIC0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC31.51■■■□□ 2.64
Smarca2Q6DIC0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Smarca2Q6DIC0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.64
Smarca2Q6DIC0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Smarca2Q6DIC0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
Smarca2Q6DIC0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
Smarca2Q6DIC0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Smarca2Q6DIC0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Smarca2Q6DIC0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
Smarca2Q6DIC0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Smarca2Q6DIC0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
Smarca2Q6DIC0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Smarca2Q6DIC0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Smarca2Q6DIC0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
Smarca2Q6DIC0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Smarca2Q6DIC0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC31.49■■■□□ 2.63
Smarca2Q6DIC0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Smarca2Q6DIC0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms