Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn9aQ62205 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.18■□□□□ 0.98
Scn9aQ62205 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn9aQ62205 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Scn9aQ62205 Spsb2-203ENSMUST00000112473 1322 ntBASIC21.18■□□□□ 0.98
Scn9aQ62205 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn9aQ62205 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn9aQ62205 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Scn9aQ62205 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Scn9aQ62205 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Scn9aQ62205 Gm7638-201ENSMUST00000121348 967 ntBASIC21.18■□□□□ 0.98
Scn9aQ62205 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.18■□□□□ 0.98
Scn9aQ62205 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC21.18■□□□□ 0.98
Scn9aQ62205 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn9aQ62205 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Scn9aQ62205 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.18■□□□□ 0.98
Scn9aQ62205 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn9aQ62205 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Scn9aQ62205 Gm13401-201ENSMUST00000117074 291 ntBASIC21.17■□□□□ 0.98
Scn9aQ62205 Gm9694-201ENSMUST00000193347 1189 ntBASIC21.17■□□□□ 0.98
Scn9aQ62205 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn9aQ62205 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Scn9aQ62205 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Scn9aQ62205 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn9aQ62205 Gm27389-201ENSMUST00000183622 195 ntBASIC21.17■□□□□ 0.98
Scn9aQ62205 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC21.17■□□□□ 0.98
Scn9aQ62205 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Scn9aQ62205 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn9aQ62205 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.16■□□□□ 0.98
Scn9aQ62205 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Scn9aQ62205 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn9aQ62205 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Scn9aQ62205 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Scn9aQ62205 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn9aQ62205 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Scn9aQ62205 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn9aQ62205 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn9aQ62205 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Scn9aQ62205 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn9aQ62205 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn9aQ62205 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn9aQ62205 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn9aQ62205 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn9aQ62205 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.16■□□□□ 0.98
Scn9aQ62205 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Scn9aQ62205 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn9aQ62205 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC21.16■□□□□ 0.98
Scn9aQ62205 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn9aQ62205 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn9aQ62205 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Scn9aQ62205 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn9aQ62205 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.15■□□□□ 0.98
Scn9aQ62205 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn9aQ62205 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Scn9aQ62205 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC21.15■□□□□ 0.98
Scn9aQ62205 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Scn9aQ62205 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Scn9aQ62205 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Scn9aQ62205 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn9aQ62205 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Scn9aQ62205 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Scn9aQ62205 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn9aQ62205 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Scn9aQ62205 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.14■□□□□ 0.97
Scn9aQ62205 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scn9aQ62205 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scn9aQ62205 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn9aQ62205 Tgds-204ENSMUST00000228543 1594 ntBASIC21.13■□□□□ 0.97
Scn9aQ62205 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn9aQ62205 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn9aQ62205 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC21.13■□□□□ 0.97
Scn9aQ62205 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn9aQ62205 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.13■□□□□ 0.97
Scn9aQ62205 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn9aQ62205 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn9aQ62205 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn9aQ62205 AC164629.2-201ENSMUST00000217916 270 ntBASIC21.12■□□□□ 0.97
Scn9aQ62205 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn9aQ62205 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn9aQ62205 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn9aQ62205 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Scn9aQ62205 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Scn9aQ62205 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scn9aQ62205 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn9aQ62205 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Scn9aQ62205 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn9aQ62205 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
Scn9aQ62205 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn9aQ62205 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Scn9aQ62205 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn9aQ62205 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn9aQ62205 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn9aQ62205 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Scn9aQ62205 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn9aQ62205 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn9aQ62205 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Scn9aQ62205 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Scn9aQ62205 Mzt1-203ENSMUST00000227948 952 ntBASIC21.1■□□□□ 0.97
Scn9aQ62205 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn9aQ62205 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms