Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Notch3Q61982 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Notch3Q61982 Gm6659-201ENSMUST00000174752 547 ntBASIC13.69□□□□□ -0.22
Notch3Q61982 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Notch3Q61982 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.69□□□□□ -0.22
Notch3Q61982 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Notch3Q61982 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Notch3Q61982 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Notch3Q61982 Gm21814-202ENSMUST00000203277 873 ntBASIC13.68□□□□□ -0.22
Notch3Q61982 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Notch3Q61982 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Notch3Q61982 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Notch3Q61982 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Notch3Q61982 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Notch3Q61982 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Notch3Q61982 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Notch3Q61982 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Notch3Q61982 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Notch3Q61982 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Notch3Q61982 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Notch3Q61982 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Notch3Q61982 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Notch3Q61982 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Notch3Q61982 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Notch3Q61982 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Notch3Q61982 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.68□□□□□ -0.22
Notch3Q61982 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Notch3Q61982 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Notch3Q61982 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Notch3Q61982 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Notch3Q61982 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Notch3Q61982 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Notch3Q61982 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Notch3Q61982 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Notch3Q61982 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.67□□□□□ -0.22
Notch3Q61982 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Notch3Q61982 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Notch3Q61982 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Notch3Q61982 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Notch3Q61982 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.67□□□□□ -0.22
Notch3Q61982 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.67□□□□□ -0.22
Notch3Q61982 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.67□□□□□ -0.22
Notch3Q61982 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.67□□□□□ -0.22
Notch3Q61982 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Notch3Q61982 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Notch3Q61982 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Notch3Q61982 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Notch3Q61982 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Notch3Q61982 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Notch3Q61982 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Notch3Q61982 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Notch3Q61982 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Notch3Q61982 Gm27741-201ENSMUST00000185060 237 ntBASIC13.67□□□□□ -0.22
Notch3Q61982 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.67□□□□□ -0.22
Notch3Q61982 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Notch3Q61982 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Notch3Q61982 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Notch3Q61982 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Notch3Q61982 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Notch3Q61982 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Notch3Q61982 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Notch3Q61982 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Notch3Q61982 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Notch3Q61982 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.66□□□□□ -0.22
Notch3Q61982 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Notch3Q61982 Mtag2-201ENSMUST00000058665 714 ntBASIC13.66□□□□□ -0.22
Notch3Q61982 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Notch3Q61982 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.66□□□□□ -0.22
Notch3Q61982 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Notch3Q61982 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Notch3Q61982 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Notch3Q61982 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Notch3Q61982 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Notch3Q61982 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Notch3Q61982 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Notch3Q61982 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Notch3Q61982 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Notch3Q61982 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Notch3Q61982 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.65□□□□□ -0.22
Notch3Q61982 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Notch3Q61982 Gm18025-201ENSMUST00000221733 862 ntBASIC13.65□□□□□ -0.22
Notch3Q61982 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.65□□□□□ -0.22
Notch3Q61982 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Notch3Q61982 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Notch3Q61982 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Notch3Q61982 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Notch3Q61982 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Notch3Q61982 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.65□□□□□ -0.22
Notch3Q61982 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.65□□□□□ -0.22
Notch3Q61982 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Notch3Q61982 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.65□□□□□ -0.22
Notch3Q61982 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Notch3Q61982 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Notch3Q61982 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Notch3Q61982 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Notch3Q61982 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Notch3Q61982 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Notch3Q61982 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Notch3Q61982 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Notch3Q61982 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms