Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxc1Q61572 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Foxc1Q61572 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Foxc1Q61572 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxc1Q61572 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Foxc1Q61572 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.1□□□□□ -0.31
Foxc1Q61572 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxc1Q61572 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxc1Q61572 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxc1Q61572 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxc1Q61572 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Foxc1Q61572 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Foxc1Q61572 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.09□□□□□ -0.31
Foxc1Q61572 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxc1Q61572 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxc1Q61572 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Foxc1Q61572 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxc1Q61572 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.09□□□□□ -0.31
Foxc1Q61572 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Foxc1Q61572 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Foxc1Q61572 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxc1Q61572 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.09□□□□□ -0.31
Foxc1Q61572 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxc1Q61572 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxc1Q61572 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Foxc1Q61572 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxc1Q61572 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxc1Q61572 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxc1Q61572 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Foxc1Q61572 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Foxc1Q61572 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Foxc1Q61572 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Foxc1Q61572 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxc1Q61572 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxc1Q61572 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.09□□□□□ -0.31
Foxc1Q61572 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Foxc1Q61572 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Foxc1Q61572 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Foxc1Q61572 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.08□□□□□ -0.31
Foxc1Q61572 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Foxc1Q61572 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Foxc1Q61572 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Foxc1Q61572 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.08□□□□□ -0.32
Foxc1Q61572 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.08□□□□□ -0.32
Foxc1Q61572 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Foxc1Q61572 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.08□□□□□ -0.32
Foxc1Q61572 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Foxc1Q61572 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Foxc1Q61572 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Foxc1Q61572 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Foxc1Q61572 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Foxc1Q61572 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Foxc1Q61572 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Foxc1Q61572 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Foxc1Q61572 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Foxc1Q61572 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Foxc1Q61572 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Foxc1Q61572 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Foxc1Q61572 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.08□□□□□ -0.32
Foxc1Q61572 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Foxc1Q61572 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Foxc1Q61572 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Foxc1Q61572 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Foxc1Q61572 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxc1Q61572 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxc1Q61572 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxc1Q61572 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxc1Q61572 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC13.07□□□□□ -0.32
Foxc1Q61572 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Foxc1Q61572 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.07□□□□□ -0.32
Foxc1Q61572 Gm12527-201ENSMUST00000117967 564 ntBASIC13.07□□□□□ -0.32
Foxc1Q61572 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.07□□□□□ -0.32
Foxc1Q61572 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.07□□□□□ -0.32
Foxc1Q61572 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.07□□□□□ -0.32
Foxc1Q61572 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.07□□□□□ -0.32
Foxc1Q61572 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Foxc1Q61572 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxc1Q61572 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxc1Q61572 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxc1Q61572 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxc1Q61572 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxc1Q61572 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxc1Q61572 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxc1Q61572 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxc1Q61572 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Foxc1Q61572 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxc1Q61572 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxc1Q61572 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.06□□□□□ -0.32
Foxc1Q61572 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Foxc1Q61572 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxc1Q61572 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxc1Q61572 BC021767-201ENSMUST00000126387 1716 ntBASIC13.06□□□□□ -0.32
Foxc1Q61572 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.06□□□□□ -0.32
Foxc1Q61572 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.06□□□□□ -0.32
Foxc1Q61572 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.06□□□□□ -0.32
Foxc1Q61572 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Foxc1Q61572 Gm20049-201ENSMUST00000219950 730 ntBASIC13.06□□□□□ -0.32
Foxc1Q61572 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxc1Q61572 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Foxc1Q61572 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms