Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Scnn1aQ61180 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scnn1aQ61180 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.62■□□□□ 0.89
Scnn1aQ61180 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scnn1aQ61180 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Scnn1aQ61180 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scnn1aQ61180 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scnn1aQ61180 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scnn1aQ61180 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scnn1aQ61180 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scnn1aQ61180 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scnn1aQ61180 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.62■□□□□ 0.89
Scnn1aQ61180 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Scnn1aQ61180 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scnn1aQ61180 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scnn1aQ61180 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scnn1aQ61180 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Scnn1aQ61180 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scnn1aQ61180 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scnn1aQ61180 Gm12085-201ENSMUST00000119263 940 ntBASIC20.61■□□□□ 0.89
Scnn1aQ61180 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scnn1aQ61180 Gm10231-201ENSMUST00000181584 441 ntBASIC20.61■□□□□ 0.89
Scnn1aQ61180 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scnn1aQ61180 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.61■□□□□ 0.89
Scnn1aQ61180 Gm10175-202ENSMUST00000208752 441 ntBASIC20.61■□□□□ 0.89
Scnn1aQ61180 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.61■□□□□ 0.89
Scnn1aQ61180 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scnn1aQ61180 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scnn1aQ61180 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scnn1aQ61180 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scnn1aQ61180 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scnn1aQ61180 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Scnn1aQ61180 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scnn1aQ61180 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scnn1aQ61180 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.6■□□□□ 0.89
Scnn1aQ61180 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scnn1aQ61180 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Scnn1aQ61180 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scnn1aQ61180 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scnn1aQ61180 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Scnn1aQ61180 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.6■□□□□ 0.89
Scnn1aQ61180 Gm38027-201ENSMUST00000192315 235 ntBASIC20.6■□□□□ 0.89
Scnn1aQ61180 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.6■□□□□ 0.89
Scnn1aQ61180 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.6■□□□□ 0.89
Scnn1aQ61180 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scnn1aQ61180 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scnn1aQ61180 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Scnn1aQ61180 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Scnn1aQ61180 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scnn1aQ61180 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scnn1aQ61180 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Scnn1aQ61180 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scnn1aQ61180 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scnn1aQ61180 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scnn1aQ61180 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scnn1aQ61180 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Scnn1aQ61180 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.59■□□□□ 0.89
Scnn1aQ61180 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scnn1aQ61180 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scnn1aQ61180 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scnn1aQ61180 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scnn1aQ61180 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Scnn1aQ61180 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scnn1aQ61180 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scnn1aQ61180 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scnn1aQ61180 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.58■□□□□ 0.89
Scnn1aQ61180 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scnn1aQ61180 Gm7889-201ENSMUST00000185591 958 ntBASIC20.58■□□□□ 0.89
Scnn1aQ61180 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.58■□□□□ 0.89
Scnn1aQ61180 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scnn1aQ61180 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scnn1aQ61180 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Scnn1aQ61180 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scnn1aQ61180 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scnn1aQ61180 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scnn1aQ61180 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Scnn1aQ61180 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.57■□□□□ 0.88
Scnn1aQ61180 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scnn1aQ61180 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scnn1aQ61180 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scnn1aQ61180 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scnn1aQ61180 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scnn1aQ61180 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scnn1aQ61180 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scnn1aQ61180 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scnn1aQ61180 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scnn1aQ61180 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Scnn1aQ61180 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scnn1aQ61180 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scnn1aQ61180 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scnn1aQ61180 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.57■□□□□ 0.88
Scnn1aQ61180 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scnn1aQ61180 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scnn1aQ61180 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scnn1aQ61180 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scnn1aQ61180 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.56■□□□□ 0.88
Scnn1aQ61180 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scnn1aQ61180 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scnn1aQ61180 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scnn1aQ61180 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms