Protein–RNA interactions for Protein: Q61056

Trpc1, Short transient receptor potential channel 1, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpc1Q61056 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trpc1Q61056 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trpc1Q61056 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpc1Q61056 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpc1Q61056 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trpc1Q61056 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.41■□□□□ 0.38
Trpc1Q61056 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trpc1Q61056 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trpc1Q61056 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpc1Q61056 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpc1Q61056 AV356131-201ENSMUST00000206201 750 ntBASIC17.41■□□□□ 0.38
Trpc1Q61056 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trpc1Q61056 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpc1Q61056 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpc1Q61056 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpc1Q61056 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpc1Q61056 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpc1Q61056 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpc1Q61056 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpc1Q61056 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpc1Q61056 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trpc1Q61056 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trpc1Q61056 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trpc1Q61056 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trpc1Q61056 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trpc1Q61056 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trpc1Q61056 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Trpc1Q61056 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.4■□□□□ 0.38
Trpc1Q61056 Gm10849-201ENSMUST00000100397 618 ntBASIC17.4■□□□□ 0.38
Trpc1Q61056 Gm13146-201ENSMUST00000118508 780 ntBASIC17.4■□□□□ 0.38
Trpc1Q61056 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trpc1Q61056 Gm27405-201ENSMUST00000184201 112 ntBASIC17.4■□□□□ 0.38
Trpc1Q61056 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trpc1Q61056 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trpc1Q61056 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trpc1Q61056 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trpc1Q61056 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trpc1Q61056 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trpc1Q61056 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.39■□□□□ 0.38
Trpc1Q61056 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trpc1Q61056 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trpc1Q61056 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trpc1Q61056 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trpc1Q61056 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trpc1Q61056 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trpc1Q61056 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trpc1Q61056 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trpc1Q61056 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trpc1Q61056 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Trpc1Q61056 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trpc1Q61056 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trpc1Q61056 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trpc1Q61056 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trpc1Q61056 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.39■□□□□ 0.37
Trpc1Q61056 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trpc1Q61056 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trpc1Q61056 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trpc1Q61056 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trpc1Q61056 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trpc1Q61056 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trpc1Q61056 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trpc1Q61056 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.38■□□□□ 0.37
Trpc1Q61056 Tgds-204ENSMUST00000228543 1594 ntBASIC17.38■□□□□ 0.37
Trpc1Q61056 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.38■□□□□ 0.37
Trpc1Q61056 Gm29257-201ENSMUST00000186115 639 ntBASIC17.38■□□□□ 0.37
Trpc1Q61056 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.38■□□□□ 0.37
Trpc1Q61056 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.38■□□□□ 0.37
Trpc1Q61056 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trpc1Q61056 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trpc1Q61056 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.38■□□□□ 0.37
Trpc1Q61056 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trpc1Q61056 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trpc1Q61056 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trpc1Q61056 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trpc1Q61056 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trpc1Q61056 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trpc1Q61056 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.38■□□□□ 0.37
Trpc1Q61056 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trpc1Q61056 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trpc1Q61056 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trpc1Q61056 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trpc1Q61056 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trpc1Q61056 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trpc1Q61056 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trpc1Q61056 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trpc1Q61056 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trpc1Q61056 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trpc1Q61056 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trpc1Q61056 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trpc1Q61056 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trpc1Q61056 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.37■□□□□ 0.37
Trpc1Q61056 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trpc1Q61056 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trpc1Q61056 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Trpc1Q61056 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trpc1Q61056 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trpc1Q61056 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Trpc1Q61056 Gm13234-201ENSMUST00000120010 747 ntBASIC17.36■□□□□ 0.37
Trpc1Q61056 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trpc1Q61056 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms