Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a4Q60857 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a4Q60857 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a4Q60857 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a4Q60857 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Slc6a4Q60857 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a4Q60857 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.31■□□□□ 0.52
Slc6a4Q60857 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.31■□□□□ 0.52
Slc6a4Q60857 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a4Q60857 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.31■□□□□ 0.52
Slc6a4Q60857 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a4Q60857 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a4Q60857 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a4Q60857 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.31■□□□□ 0.52
Slc6a4Q60857 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a4Q60857 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a4Q60857 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a4Q60857 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a4Q60857 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a4Q60857 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a4Q60857 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Slc6a4Q60857 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a4Q60857 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a4Q60857 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a4Q60857 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a4Q60857 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a4Q60857 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.3■□□□□ 0.52
Slc6a4Q60857 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.3■□□□□ 0.52
Slc6a4Q60857 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a4Q60857 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a4Q60857 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a4Q60857 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a4Q60857 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a4Q60857 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a4Q60857 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a4Q60857 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a4Q60857 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a4Q60857 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a4Q60857 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a4Q60857 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a4Q60857 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Slc6a4Q60857 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a4Q60857 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a4Q60857 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.29■□□□□ 0.52
Slc6a4Q60857 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.29■□□□□ 0.52
Slc6a4Q60857 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a4Q60857 Gm5417-201ENSMUST00000079706 384 ntBASIC18.29■□□□□ 0.52
Slc6a4Q60857 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a4Q60857 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a4Q60857 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a4Q60857 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a4Q60857 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a4Q60857 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Slc6a4Q60857 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc6a4Q60857 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc6a4Q60857 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
Slc6a4Q60857 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc6a4Q60857 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slc6a4Q60857 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc6a4Q60857 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slc6a4Q60857 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.28■□□□□ 0.52
Slc6a4Q60857 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.28■□□□□ 0.52
Slc6a4Q60857 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc6a4Q60857 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Slc6a4Q60857 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Slc6a4Q60857 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc6a4Q60857 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc6a4Q60857 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc6a4Q60857 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc6a4Q60857 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc6a4Q60857 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a4Q60857 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a4Q60857 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a4Q60857 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.27■□□□□ 0.52
Slc6a4Q60857 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a4Q60857 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a4Q60857 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Slc6a4Q60857 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.27■□□□□ 0.52
Slc6a4Q60857 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a4Q60857 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a4Q60857 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Slc6a4Q60857 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.27■□□□□ 0.52
Slc6a4Q60857 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.27■□□□□ 0.52
Slc6a4Q60857 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a4Q60857 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a4Q60857 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a4Q60857 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slc6a4Q60857 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slc6a4Q60857 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Slc6a4Q60857 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slc6a4Q60857 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slc6a4Q60857 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slc6a4Q60857 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Slc6a4Q60857 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Slc6a4Q60857 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Slc6a4Q60857 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Slc6a4Q60857 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a4Q60857 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Slc6a4Q60857 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a4Q60857 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms