Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Gm15375-201ENSMUST00000119510 849 ntBASIC20.87■□□□□ 0.93
Prdm1Q60636 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.87■□□□□ 0.93
Prdm1Q60636 Gm8520-201ENSMUST00000186517 868 ntBASIC20.87■□□□□ 0.93
Prdm1Q60636 Gm18666-201ENSMUST00000190039 958 ntBASIC20.87■□□□□ 0.93
Prdm1Q60636 Gm10138-203ENSMUST00000206952 366 ntBASIC20.87■□□□□ 0.93
Prdm1Q60636 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Prdm1Q60636 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prdm1Q60636 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prdm1Q60636 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.87■□□□□ 0.93
Prdm1Q60636 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prdm1Q60636 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Prdm1Q60636 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Prdm1Q60636 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prdm1Q60636 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prdm1Q60636 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Prdm1Q60636 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Prdm1Q60636 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prdm1Q60636 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prdm1Q60636 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.86■□□□□ 0.93
Prdm1Q60636 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.86■□□□□ 0.93
Prdm1Q60636 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Prdm1Q60636 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.86■□□□□ 0.93
Prdm1Q60636 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.86■□□□□ 0.93
Prdm1Q60636 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prdm1Q60636 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prdm1Q60636 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prdm1Q60636 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.86■□□□□ 0.93
Prdm1Q60636 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prdm1Q60636 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.85■□□□□ 0.93
Prdm1Q60636 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Prdm1Q60636 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prdm1Q60636 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prdm1Q60636 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prdm1Q60636 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prdm1Q60636 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Prdm1Q60636 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.85■□□□□ 0.93
Prdm1Q60636 Gm22240-201ENSMUST00000175225 82 ntBASIC20.85■□□□□ 0.93
Prdm1Q60636 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prdm1Q60636 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prdm1Q60636 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Prdm1Q60636 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.85■□□□□ 0.93
Prdm1Q60636 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Prdm1Q60636 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Prdm1Q60636 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.84■□□□□ 0.93
Prdm1Q60636 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prdm1Q60636 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.84■□□□□ 0.93
Prdm1Q60636 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.84■□□□□ 0.93
Prdm1Q60636 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.84■□□□□ 0.93
Prdm1Q60636 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Prdm1Q60636 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Prdm1Q60636 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Prdm1Q60636 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Prdm1Q60636 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prdm1Q60636 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prdm1Q60636 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prdm1Q60636 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Prdm1Q60636 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prdm1Q60636 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prdm1Q60636 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prdm1Q60636 Gm42545-201ENSMUST00000202755 922 ntBASIC20.83■□□□□ 0.93
Prdm1Q60636 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.83■□□□□ 0.93
Prdm1Q60636 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prdm1Q60636 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prdm1Q60636 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Prdm1Q60636 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Prdm1Q60636 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Prdm1Q60636 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Prdm1Q60636 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Prdm1Q60636 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
Prdm1Q60636 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prdm1Q60636 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prdm1Q60636 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Prdm1Q60636 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.82■□□□□ 0.92
Prdm1Q60636 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Prdm1Q60636 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Prdm1Q60636 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.82■□□□□ 0.92
Prdm1Q60636 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prdm1Q60636 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.82■□□□□ 0.92
Prdm1Q60636 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.82■□□□□ 0.92
Prdm1Q60636 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prdm1Q60636 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prdm1Q60636 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prdm1Q60636 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Prdm1Q60636 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.82■□□□□ 0.92
Prdm1Q60636 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prdm1Q60636 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.81■□□□□ 0.92
Prdm1Q60636 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Prdm1Q60636 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prdm1Q60636 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prdm1Q60636 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Prdm1Q60636 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Prdm1Q60636 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.81■□□□□ 0.92
Prdm1Q60636 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.81■□□□□ 0.92
Prdm1Q60636 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.81■□□□□ 0.92
Prdm1Q60636 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prdm1Q60636 Rarb-207ENSMUST00000225921 2756 ntBASIC20.81■□□□□ 0.92
Prdm1Q60636 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Prdm1Q60636 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prdm1Q60636 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prdm1Q60636 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms