Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atp13a4Q5XF90 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atp13a4Q5XF90 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atp13a4Q5XF90 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atp13a4Q5XF90 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Atp13a4Q5XF90 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp13a4Q5XF90 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp13a4Q5XF90 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Atp13a4Q5XF90 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Atp13a4Q5XF90 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp13a4Q5XF90 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp13a4Q5XF90 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
Atp13a4Q5XF90 Gm37856-201ENSMUST00000191634 999 ntBASIC19.32■□□□□ 0.68
Atp13a4Q5XF90 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.32■□□□□ 0.68
Atp13a4Q5XF90 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp13a4Q5XF90 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp13a4Q5XF90 Idnk-204ENSMUST00000226010 1898 ntBASIC19.32■□□□□ 0.68
Atp13a4Q5XF90 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp13a4Q5XF90 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Atp13a4Q5XF90 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp13a4Q5XF90 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Atp13a4Q5XF90 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atp13a4Q5XF90 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp13a4Q5XF90 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.31■□□□□ 0.68
Atp13a4Q5XF90 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp13a4Q5XF90 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp13a4Q5XF90 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp13a4Q5XF90 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.31■□□□□ 0.68
Atp13a4Q5XF90 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp13a4Q5XF90 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp13a4Q5XF90 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Atp13a4Q5XF90 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Atp13a4Q5XF90 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atp13a4Q5XF90 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp13a4Q5XF90 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.31■□□□□ 0.68
Atp13a4Q5XF90 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp13a4Q5XF90 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Atp13a4Q5XF90 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.3■□□□□ 0.68
Atp13a4Q5XF90 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.3■□□□□ 0.68
Atp13a4Q5XF90 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp13a4Q5XF90 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp13a4Q5XF90 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.3■□□□□ 0.68
Atp13a4Q5XF90 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.3■□□□□ 0.68
Atp13a4Q5XF90 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Atp13a4Q5XF90 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp13a4Q5XF90 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp13a4Q5XF90 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp13a4Q5XF90 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atp13a4Q5XF90 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp13a4Q5XF90 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atp13a4Q5XF90 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp13a4Q5XF90 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atp13a4Q5XF90 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.29■□□□□ 0.68
Atp13a4Q5XF90 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.29■□□□□ 0.68
Atp13a4Q5XF90 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp13a4Q5XF90 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp13a4Q5XF90 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp13a4Q5XF90 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp13a4Q5XF90 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp13a4Q5XF90 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp13a4Q5XF90 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.28■□□□□ 0.68
Atp13a4Q5XF90 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atp13a4Q5XF90 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Atp13a4Q5XF90 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atp13a4Q5XF90 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp13a4Q5XF90 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Atp13a4Q5XF90 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.28■□□□□ 0.68
Atp13a4Q5XF90 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp13a4Q5XF90 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atp13a4Q5XF90 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp13a4Q5XF90 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp13a4Q5XF90 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp13a4Q5XF90 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.28■□□□□ 0.68
Atp13a4Q5XF90 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp13a4Q5XF90 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp13a4Q5XF90 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.27■□□□□ 0.68
Atp13a4Q5XF90 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp13a4Q5XF90 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atp13a4Q5XF90 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Atp13a4Q5XF90 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp13a4Q5XF90 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp13a4Q5XF90 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.27■□□□□ 0.68
Atp13a4Q5XF90 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp13a4Q5XF90 Mir2861-201ENSMUST00000175539 82 ntBASIC19.27■□□□□ 0.68
Atp13a4Q5XF90 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp13a4Q5XF90 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp13a4Q5XF90 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp13a4Q5XF90 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.27■□□□□ 0.67
Atp13a4Q5XF90 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atp13a4Q5XF90 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atp13a4Q5XF90 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atp13a4Q5XF90 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atp13a4Q5XF90 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp13a4Q5XF90 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Atp13a4Q5XF90 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp13a4Q5XF90 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atp13a4Q5XF90 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp13a4Q5XF90 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp13a4Q5XF90 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atp13a4Q5XF90 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms