Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trav8d-1Q5R1H8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-1Q5R1H8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav8d-1Q5R1H8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-1Q5R1H8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-1Q5R1H8 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.64□□□□□ -0.07
Trav8d-1Q5R1H8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-1Q5R1H8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav8d-1Q5R1H8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-1Q5R1H8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-1Q5R1H8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-1Q5R1H8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-1Q5R1H8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-1Q5R1H8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav8d-1Q5R1H8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Gm18284-201ENSMUST00000172604 624 ntBASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Gm10493-201ENSMUST00000097270 612 ntBASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-1Q5R1H8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav8d-1Q5R1H8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.62□□□□□ -0.07
Trav8d-1Q5R1H8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-1Q5R1H8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-1Q5R1H8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-1Q5R1H8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-1Q5R1H8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Trav8d-1Q5R1H8 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.62□□□□□ -0.07
Trav8d-1Q5R1H8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-1Q5R1H8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-1Q5R1H8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav8d-1Q5R1H8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-1Q5R1H8 Gm5874-201ENSMUST00000096101 508 ntBASIC14.62□□□□□ -0.07
Trav8d-1Q5R1H8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-1Q5R1H8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-1Q5R1H8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav8d-1Q5R1H8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-1Q5R1H8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-1Q5R1H8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-1Q5R1H8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-1Q5R1H8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-1Q5R1H8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-1Q5R1H8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-1Q5R1H8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-1Q5R1H8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-1Q5R1H8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-1Q5R1H8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-1Q5R1H8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-1Q5R1H8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-1Q5R1H8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav8d-1Q5R1H8 Gm8495-201ENSMUST00000188740 694 ntBASIC14.61□□□□□ -0.07
Trav8d-1Q5R1H8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-1Q5R1H8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-1Q5R1H8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav8d-1Q5R1H8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-1Q5R1H8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-1Q5R1H8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-1Q5R1H8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-1Q5R1H8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms