Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5d-4Q5R1F6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5d-4Q5R1F6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5d-4Q5R1F6 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5d-4Q5R1F6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5d-4Q5R1F6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5d-4Q5R1F6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5d-4Q5R1F6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5d-4Q5R1F6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5d-4Q5R1F6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5d-4Q5R1F6 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5d-4Q5R1F6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5d-4Q5R1F6 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.36■□□□□ 0.05
Trav5d-4Q5R1F6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5d-4Q5R1F6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.36■□□□□ 0.05
Trav5d-4Q5R1F6 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.36■□□□□ 0.05
Trav5d-4Q5R1F6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Trav5d-4Q5R1F6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5d-4Q5R1F6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5d-4Q5R1F6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav5d-4Q5R1F6 Mir5133-201ENSMUST00000174955 77 ntBASIC15.36■□□□□ 0.05
Trav5d-4Q5R1F6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5d-4Q5R1F6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5d-4Q5R1F6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5d-4Q5R1F6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5d-4Q5R1F6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5d-4Q5R1F6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5d-4Q5R1F6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5d-4Q5R1F6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5d-4Q5R1F6 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav5d-4Q5R1F6 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5d-4Q5R1F6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5d-4Q5R1F6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5d-4Q5R1F6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5d-4Q5R1F6 Gm37179-201ENSMUST00000194862 823 ntBASIC15.35■□□□□ 0.05
Trav5d-4Q5R1F6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav5d-4Q5R1F6 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.35■□□□□ 0.05
Trav5d-4Q5R1F6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5d-4Q5R1F6 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.35■□□□□ 0.05
Trav5d-4Q5R1F6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav5d-4Q5R1F6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5d-4Q5R1F6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5d-4Q5R1F6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav5d-4Q5R1F6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5d-4Q5R1F6 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.34■□□□□ 0.05
Trav5d-4Q5R1F6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5d-4Q5R1F6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trav5d-4Q5R1F6 Gm13148-201ENSMUST00000118892 745 ntBASIC15.34■□□□□ 0.05
Trav5d-4Q5R1F6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.34■□□□□ 0.05
Trav5d-4Q5R1F6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav5d-4Q5R1F6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav5d-4Q5R1F6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5d-4Q5R1F6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5d-4Q5R1F6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Trav5d-4Q5R1F6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5d-4Q5R1F6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav5d-4Q5R1F6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav5d-4Q5R1F6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.33■□□□□ 0.05
Trav5d-4Q5R1F6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav5d-4Q5R1F6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav5d-4Q5R1F6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav5d-4Q5R1F6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav5d-4Q5R1F6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5d-4Q5R1F6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5d-4Q5R1F6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trav5d-4Q5R1F6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5d-4Q5R1F6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5d-4Q5R1F6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5d-4Q5R1F6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trav5d-4Q5R1F6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.33■□□□□ 0.04
Trav5d-4Q5R1F6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5d-4Q5R1F6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5d-4Q5R1F6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5d-4Q5R1F6 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5d-4Q5R1F6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5d-4Q5R1F6 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5d-4Q5R1F6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms