Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.47■□□□□ 0.39
Trav8d-2Q5R1B6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.47■□□□□ 0.39
Trav8d-2Q5R1B6 Gm7153-201ENSMUST00000117092 455 ntBASIC17.47■□□□□ 0.39
Trav8d-2Q5R1B6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.47■□□□□ 0.39
Trav8d-2Q5R1B6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.47■□□□□ 0.39
Trav8d-2Q5R1B6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav8d-2Q5R1B6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav8d-2Q5R1B6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav8d-2Q5R1B6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav8d-2Q5R1B6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav8d-2Q5R1B6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trav8d-2Q5R1B6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav8d-2Q5R1B6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav8d-2Q5R1B6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trav8d-2Q5R1B6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav8d-2Q5R1B6 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.47■□□□□ 0.39
Trav8d-2Q5R1B6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trav8d-2Q5R1B6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8d-2Q5R1B6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.46■□□□□ 0.39
Trav8d-2Q5R1B6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8d-2Q5R1B6 Gm10418-201ENSMUST00000100943 576 ntBASIC17.46■□□□□ 0.39
Trav8d-2Q5R1B6 Gm18669-201ENSMUST00000216049 778 ntBASIC17.46■□□□□ 0.39
Trav8d-2Q5R1B6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8d-2Q5R1B6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8d-2Q5R1B6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8d-2Q5R1B6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8d-2Q5R1B6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8d-2Q5R1B6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trav8d-2Q5R1B6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8d-2Q5R1B6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8d-2Q5R1B6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav8d-2Q5R1B6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav8d-2Q5R1B6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav8d-2Q5R1B6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav8d-2Q5R1B6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav8d-2Q5R1B6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav8d-2Q5R1B6 Gm24841-201ENSMUST00000158676 357 ntBASIC17.45■□□□□ 0.38
Trav8d-2Q5R1B6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav8d-2Q5R1B6 Gm7370-201ENSMUST00000219471 767 ntBASIC17.45■□□□□ 0.38
Trav8d-2Q5R1B6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav8d-2Q5R1B6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav8d-2Q5R1B6 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.45■□□□□ 0.38
Trav8d-2Q5R1B6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav8d-2Q5R1B6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trav8d-2Q5R1B6 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.44■□□□□ 0.38
Trav8d-2Q5R1B6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8d-2Q5R1B6 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.44■□□□□ 0.38
Trav8d-2Q5R1B6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8d-2Q5R1B6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8d-2Q5R1B6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Trav8d-2Q5R1B6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.44■□□□□ 0.38
Trav8d-2Q5R1B6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8d-2Q5R1B6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8d-2Q5R1B6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8d-2Q5R1B6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8d-2Q5R1B6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trav8d-2Q5R1B6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8d-2Q5R1B6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8d-2Q5R1B6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8d-2Q5R1B6 Gm17808-201ENSMUST00000200859 894 ntBASIC17.43■□□□□ 0.38
Trav8d-2Q5R1B6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8d-2Q5R1B6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8d-2Q5R1B6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8d-2Q5R1B6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8d-2Q5R1B6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trav8d-2Q5R1B6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8d-2Q5R1B6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8d-2Q5R1B6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8d-2Q5R1B6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trav8d-2Q5R1B6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8d-2Q5R1B6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8d-2Q5R1B6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8d-2Q5R1B6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8d-2Q5R1B6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trav8d-2Q5R1B6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8d-2Q5R1B6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Trav8d-2Q5R1B6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8d-2Q5R1B6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8d-2Q5R1B6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8d-2Q5R1B6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8d-2Q5R1B6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8d-2Q5R1B6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8d-2Q5R1B6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8d-2Q5R1B6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8d-2Q5R1B6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8d-2Q5R1B6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8d-2Q5R1B6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8d-2Q5R1B6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.41■□□□□ 0.38
Trav8d-2Q5R1B6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.41■□□□□ 0.38
Trav8d-2Q5R1B6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.41■□□□□ 0.38
Trav8d-2Q5R1B6 Gm7213-201ENSMUST00000215977 950 ntBASIC17.41■□□□□ 0.38
Trav8d-2Q5R1B6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8d-2Q5R1B6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8d-2Q5R1B6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8d-2Q5R1B6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8d-2Q5R1B6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8d-2Q5R1B6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8d-2Q5R1B6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8d-2Q5R1B6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav8d-2Q5R1B6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms