Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.18■□□□□ 0.5
Rnf43Q5NCP0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf43Q5NCP0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf43Q5NCP0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf43Q5NCP0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.18■□□□□ 0.5
Rnf43Q5NCP0 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.18■□□□□ 0.5
Rnf43Q5NCP0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.18■□□□□ 0.5
Rnf43Q5NCP0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.18■□□□□ 0.5
Rnf43Q5NCP0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf43Q5NCP0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf43Q5NCP0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf43Q5NCP0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Rnf43Q5NCP0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf43Q5NCP0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf43Q5NCP0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf43Q5NCP0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf43Q5NCP0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf43Q5NCP0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rnf43Q5NCP0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf43Q5NCP0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf43Q5NCP0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf43Q5NCP0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf43Q5NCP0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf43Q5NCP0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf43Q5NCP0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf43Q5NCP0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf43Q5NCP0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf43Q5NCP0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf43Q5NCP0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf43Q5NCP0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf43Q5NCP0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.17■□□□□ 0.5
Rnf43Q5NCP0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf43Q5NCP0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf43Q5NCP0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf43Q5NCP0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf43Q5NCP0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf43Q5NCP0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf43Q5NCP0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf43Q5NCP0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.16■□□□□ 0.5
Rnf43Q5NCP0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf43Q5NCP0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf43Q5NCP0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Rnf43Q5NCP0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf43Q5NCP0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 AA414768-201ENSMUST00000121924 1257 ntBASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 Gm6345-202ENSMUST00000180900 204 ntBASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf43Q5NCP0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf43Q5NCP0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf43Q5NCP0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.14■□□□□ 0.49
Rnf43Q5NCP0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.14■□□□□ 0.49
Rnf43Q5NCP0 Gm38027-201ENSMUST00000192315 235 ntBASIC18.14■□□□□ 0.49
Rnf43Q5NCP0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Rnf43Q5NCP0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf43Q5NCP0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf43Q5NCP0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf43Q5NCP0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rnf43Q5NCP0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rnf43Q5NCP0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.14■□□□□ 0.49
Rnf43Q5NCP0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rnf43Q5NCP0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rnf43Q5NCP0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf43Q5NCP0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf43Q5NCP0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf43Q5NCP0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Rnf43Q5NCP0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf43Q5NCP0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf43Q5NCP0 Gm10517-202ENSMUST00000192970 758 ntBASIC18.13■□□□□ 0.49
Rnf43Q5NCP0 Gm33142-201ENSMUST00000193913 867 ntBASIC18.13■□□□□ 0.49
Rnf43Q5NCP0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.13■□□□□ 0.49
Rnf43Q5NCP0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf43Q5NCP0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf43Q5NCP0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Rnf43Q5NCP0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf43Q5NCP0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf43Q5NCP0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf43Q5NCP0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf43Q5NCP0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf43Q5NCP0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Rnf43Q5NCP0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms