Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Bdp1Q571C7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Bdp1Q571C7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Bdp1Q571C7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Bdp1Q571C7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.22■□□□□ 0.51
Bdp1Q571C7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Bdp1Q571C7 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Bdp1Q571C7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Bdp1Q571C7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Bdp1Q571C7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Bdp1Q571C7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Bdp1Q571C7 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.21■□□□□ 0.51
Bdp1Q571C7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Bdp1Q571C7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Bdp1Q571C7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.21■□□□□ 0.51
Bdp1Q571C7 Gm10576-201ENSMUST00000191927 825 ntBASIC18.21■□□□□ 0.51
Bdp1Q571C7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.21■□□□□ 0.51
Bdp1Q571C7 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Bdp1Q571C7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.21■□□□□ 0.51
Bdp1Q571C7 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Bdp1Q571C7 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.21■□□□□ 0.51
Bdp1Q571C7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Bdp1Q571C7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Bdp1Q571C7 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.21■□□□□ 0.5
Bdp1Q571C7 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.21■□□□□ 0.5
Bdp1Q571C7 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Bdp1Q571C7 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Bdp1Q571C7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Bdp1Q571C7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
Bdp1Q571C7 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.2■□□□□ 0.5
Bdp1Q571C7 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.2■□□□□ 0.5
Bdp1Q571C7 Gm5364-201ENSMUST00000216789 889 ntBASIC18.2■□□□□ 0.5
Bdp1Q571C7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Bdp1Q571C7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Bdp1Q571C7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Bdp1Q571C7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Bdp1Q571C7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.2■□□□□ 0.5
Bdp1Q571C7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Bdp1Q571C7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Bdp1Q571C7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Bdp1Q571C7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Bdp1Q571C7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Bdp1Q571C7 Gm23935-201ENSMUST00000102303 57 ntBASIC18.2■□□□□ 0.5
Bdp1Q571C7 Gm24270-201ENSMUST00000102326 57 ntBASIC18.2■□□□□ 0.5
Bdp1Q571C7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Bdp1Q571C7 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Bdp1Q571C7 Gm24245-201ENSMUST00000157318 57 ntBASIC18.2■□□□□ 0.5
Bdp1Q571C7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Bdp1Q571C7 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Bdp1Q571C7 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Bdp1Q571C7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Bdp1Q571C7 Gm10418-201ENSMUST00000100943 576 ntBASIC18.19■□□□□ 0.5
Bdp1Q571C7 Gm2756-201ENSMUST00000195851 400 ntBASIC18.19■□□□□ 0.5
Bdp1Q571C7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Bdp1Q571C7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Bdp1Q571C7 Gm26039-201ENSMUST00000158152 144 ntBASIC18.18■□□□□ 0.5
Bdp1Q571C7 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Bdp1Q571C7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Bdp1Q571C7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Bdp1Q571C7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Bdp1Q571C7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.18■□□□□ 0.5
Bdp1Q571C7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Bdp1Q571C7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Bdp1Q571C7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Bdp1Q571C7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Bdp1Q571C7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Bdp1Q571C7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Bdp1Q571C7 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Bdp1Q571C7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.17■□□□□ 0.5
Bdp1Q571C7 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Bdp1Q571C7 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.17■□□□□ 0.5
Bdp1Q571C7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Bdp1Q571C7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Bdp1Q571C7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Bdp1Q571C7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Bdp1Q571C7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Bdp1Q571C7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Bdp1Q571C7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Bdp1Q571C7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Bdp1Q571C7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Bdp1Q571C7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Bdp1Q571C7 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Bdp1Q571C7 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Bdp1Q571C7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.17■□□□□ 0.5
Bdp1Q571C7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Bdp1Q571C7 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
Bdp1Q571C7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.16■□□□□ 0.5
Bdp1Q571C7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.16■□□□□ 0.5
Bdp1Q571C7 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.16■□□□□ 0.5
Bdp1Q571C7 Gm4974-201ENSMUST00000209974 875 ntBASIC18.16■□□□□ 0.5
Bdp1Q571C7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.16■□□□□ 0.5
Bdp1Q571C7 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Bdp1Q571C7 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bdp1Q571C7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bdp1Q571C7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bdp1Q571C7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Bdp1Q571C7 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bdp1Q571C7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bdp1Q571C7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Bdp1Q571C7 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms