Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.29■□□□□ 0.68
R3hdm4Q4VBF2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
R3hdm4Q4VBF2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
R3hdm4Q4VBF2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
R3hdm4Q4VBF2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
R3hdm4Q4VBF2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.29■□□□□ 0.68
R3hdm4Q4VBF2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
R3hdm4Q4VBF2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
R3hdm4Q4VBF2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
R3hdm4Q4VBF2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3hdm4Q4VBF2 Gm22240-201ENSMUST00000175225 82 ntBASIC19.28■□□□□ 0.68
R3hdm4Q4VBF2 Gm42545-201ENSMUST00000202755 922 ntBASIC19.28■□□□□ 0.68
R3hdm4Q4VBF2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
R3hdm4Q4VBF2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3hdm4Q4VBF2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3hdm4Q4VBF2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.28■□□□□ 0.68
R3hdm4Q4VBF2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3hdm4Q4VBF2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3hdm4Q4VBF2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3hdm4Q4VBF2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3hdm4Q4VBF2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.27■□□□□ 0.68
R3hdm4Q4VBF2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
R3hdm4Q4VBF2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
R3hdm4Q4VBF2 Mir6349-201ENSMUST00000184059 97 ntBASIC19.27■□□□□ 0.68
R3hdm4Q4VBF2 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.27■□□□□ 0.68
R3hdm4Q4VBF2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.27■□□□□ 0.68
R3hdm4Q4VBF2 Gm18025-201ENSMUST00000221733 862 ntBASIC19.27■□□□□ 0.68
R3hdm4Q4VBF2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3hdm4Q4VBF2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3hdm4Q4VBF2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3hdm4Q4VBF2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3hdm4Q4VBF2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3hdm4Q4VBF2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3hdm4Q4VBF2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.27■□□□□ 0.67
R3hdm4Q4VBF2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
R3hdm4Q4VBF2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
R3hdm4Q4VBF2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3hdm4Q4VBF2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
R3hdm4Q4VBF2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3hdm4Q4VBF2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
R3hdm4Q4VBF2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3hdm4Q4VBF2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3hdm4Q4VBF2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3hdm4Q4VBF2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3hdm4Q4VBF2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.26■□□□□ 0.67
R3hdm4Q4VBF2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3hdm4Q4VBF2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
R3hdm4Q4VBF2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.26■□□□□ 0.67
R3hdm4Q4VBF2 Idnk-204ENSMUST00000226010 1898 ntBASIC19.26■□□□□ 0.67
R3hdm4Q4VBF2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.25■□□□□ 0.67
R3hdm4Q4VBF2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3hdm4Q4VBF2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3hdm4Q4VBF2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
R3hdm4Q4VBF2 Rarb-207ENSMUST00000225921 2756 ntBASIC19.25■□□□□ 0.67
R3hdm4Q4VBF2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
R3hdm4Q4VBF2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3hdm4Q4VBF2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
R3hdm4Q4VBF2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3hdm4Q4VBF2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
R3hdm4Q4VBF2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3hdm4Q4VBF2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.25■□□□□ 0.67
R3hdm4Q4VBF2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3hdm4Q4VBF2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3hdm4Q4VBF2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3hdm4Q4VBF2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3hdm4Q4VBF2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
R3hdm4Q4VBF2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
R3hdm4Q4VBF2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
R3hdm4Q4VBF2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
R3hdm4Q4VBF2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.24■□□□□ 0.67
R3hdm4Q4VBF2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3hdm4Q4VBF2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
R3hdm4Q4VBF2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3hdm4Q4VBF2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
R3hdm4Q4VBF2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
R3hdm4Q4VBF2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
R3hdm4Q4VBF2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3hdm4Q4VBF2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3hdm4Q4VBF2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3hdm4Q4VBF2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3hdm4Q4VBF2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.23■□□□□ 0.67
R3hdm4Q4VBF2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
R3hdm4Q4VBF2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.23■□□□□ 0.67
R3hdm4Q4VBF2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.23■□□□□ 0.67
R3hdm4Q4VBF2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
R3hdm4Q4VBF2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3hdm4Q4VBF2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3hdm4Q4VBF2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3hdm4Q4VBF2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
R3hdm4Q4VBF2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3hdm4Q4VBF2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3hdm4Q4VBF2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
R3hdm4Q4VBF2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
R3hdm4Q4VBF2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
R3hdm4Q4VBF2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
R3hdm4Q4VBF2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
R3hdm4Q4VBF2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.22■□□□□ 0.67
R3hdm4Q4VBF2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
R3hdm4Q4VBF2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.22■□□□□ 0.67
R3hdm4Q4VBF2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms