Protein–RNA interactions for Protein: Q3UHU5

Mtcl1, Microtubule cross-linking factor 1, mousemouse

Predictions only

Length 1,945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mtcl1Q3UHU5 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC21.33■■□□□ 1.01
Mtcl1Q3UHU5 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC21.33■■□□□ 1.01
Mtcl1Q3UHU5 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC21.33■■□□□ 1.01
Mtcl1Q3UHU5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Mtcl1Q3UHU5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Mtcl1Q3UHU5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Mtcl1Q3UHU5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC21.33■■□□□ 1
Mtcl1Q3UHU5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Mtcl1Q3UHU5 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Mtcl1Q3UHU5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Mtcl1Q3UHU5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Mtcl1Q3UHU5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.33■■□□□ 1
Mtcl1Q3UHU5 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mtcl1Q3UHU5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mtcl1Q3UHU5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC21.32■■□□□ 1
Mtcl1Q3UHU5 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC21.32■■□□□ 1
Mtcl1Q3UHU5 Gm21559-201ENSMUST00000220638 855 ntBASIC21.32■■□□□ 1
Mtcl1Q3UHU5 Gm8587-201ENSMUST00000076538 843 ntBASIC21.32■■□□□ 1
Mtcl1Q3UHU5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Mtcl1Q3UHU5 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.32■■□□□ 1
Mtcl1Q3UHU5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mtcl1Q3UHU5 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC21.31■■□□□ 1
Mtcl1Q3UHU5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
Mtcl1Q3UHU5 Gm11950-201ENSMUST00000121615 838 ntBASIC21.31■■□□□ 1
Mtcl1Q3UHU5 Gm24841-201ENSMUST00000158676 357 ntBASIC21.31■■□□□ 1
Mtcl1Q3UHU5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mtcl1Q3UHU5 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Mtcl1Q3UHU5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mtcl1Q3UHU5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mtcl1Q3UHU5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mtcl1Q3UHU5 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mtcl1Q3UHU5 Gm10418-201ENSMUST00000100943 576 ntBASIC21.31■■□□□ 1
Mtcl1Q3UHU5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC21.31■■□□□ 1
Mtcl1Q3UHU5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.31■■□□□ 1
Mtcl1Q3UHU5 Gm18958-201ENSMUST00000174258 762 ntBASIC21.31■■□□□ 1
Mtcl1Q3UHU5 Otx2os1-206ENSMUST00000228153 787 ntBASIC21.31■■□□□ 1
Mtcl1Q3UHU5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.31■■□□□ 1
Mtcl1Q3UHU5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mtcl1Q3UHU5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mtcl1Q3UHU5 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
Mtcl1Q3UHU5 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Mtcl1Q3UHU5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Mtcl1Q3UHU5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Mtcl1Q3UHU5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Mtcl1Q3UHU5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Mtcl1Q3UHU5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.3■■□□□ 1
Mtcl1Q3UHU5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mtcl1Q3UHU5 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC21.3■■□□□ 1
Mtcl1Q3UHU5 Gm27389-201ENSMUST00000183622 195 ntBASIC21.3■■□□□ 1
Mtcl1Q3UHU5 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mtcl1Q3UHU5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Mtcl1Q3UHU5 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.3■■□□□ 1
Mtcl1Q3UHU5 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mtcl1Q3UHU5 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC21.29■■□□□ 1
Mtcl1Q3UHU5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.29■■□□□ 1
Mtcl1Q3UHU5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.29■■□□□ 1
Mtcl1Q3UHU5 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.29■■□□□ 1
Mtcl1Q3UHU5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.29■■□□□ 1
Mtcl1Q3UHU5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mtcl1Q3UHU5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mtcl1Q3UHU5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC21.29■■□□□ 1
Mtcl1Q3UHU5 Gm27357-201ENSMUST00000183754 135 ntBASIC21.29■■□□□ 1
Mtcl1Q3UHU5 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mtcl1Q3UHU5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Mtcl1Q3UHU5 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mtcl1Q3UHU5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mtcl1Q3UHU5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Mtcl1Q3UHU5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.28■■□□□ 1
Mtcl1Q3UHU5 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mtcl1Q3UHU5 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC21.28■■□□□ 1
Mtcl1Q3UHU5 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC21.28■■□□□ 1
Mtcl1Q3UHU5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Mtcl1Q3UHU5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mtcl1Q3UHU5 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.28■■□□□ 1
Mtcl1Q3UHU5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mtcl1Q3UHU5 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mtcl1Q3UHU5 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Mtcl1Q3UHU5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.28■■□□□ 1
Mtcl1Q3UHU5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Mtcl1Q3UHU5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mtcl1Q3UHU5 Gm7213-201ENSMUST00000215977 950 ntBASIC21.27■■□□□ 1
Mtcl1Q3UHU5 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mtcl1Q3UHU5 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC21.27■■□□□ 1
Mtcl1Q3UHU5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mtcl1Q3UHU5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Mtcl1Q3UHU5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mtcl1Q3UHU5 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Mtcl1Q3UHU5 Mir770-201ENSMUST00000103252 94 ntBASIC21.27■■□□□ 1
Mtcl1Q3UHU5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC21.27■■□□□ 1
Mtcl1Q3UHU5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Mtcl1Q3UHU5 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mtcl1Q3UHU5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.27■■□□□ 1
Mtcl1Q3UHU5 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Mtcl1Q3UHU5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.27■□□□□ 0.99
Mtcl1Q3UHU5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.26■□□□□ 0.99
Mtcl1Q3UHU5 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Mtcl1Q3UHU5 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.26■□□□□ 0.99
Mtcl1Q3UHU5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mtcl1Q3UHU5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mtcl1Q3UHU5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms