Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnrc6aQ3UHK8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnrc6aQ3UHK8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Tnrc6aQ3UHK8 Gm38027-201ENSMUST00000192315 235 ntBASIC16.6■□□□□ 0.25
Tnrc6aQ3UHK8 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.6■□□□□ 0.25
Tnrc6aQ3UHK8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnrc6aQ3UHK8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnrc6aQ3UHK8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnrc6aQ3UHK8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnrc6aQ3UHK8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnrc6aQ3UHK8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnrc6aQ3UHK8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Tnrc6aQ3UHK8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnrc6aQ3UHK8 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.59■□□□□ 0.25
Tnrc6aQ3UHK8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.59■□□□□ 0.25
Tnrc6aQ3UHK8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.59■□□□□ 0.25
Tnrc6aQ3UHK8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnrc6aQ3UHK8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.59■□□□□ 0.25
Tnrc6aQ3UHK8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnrc6aQ3UHK8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Tnrc6aQ3UHK8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnrc6aQ3UHK8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnrc6aQ3UHK8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Tnrc6aQ3UHK8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.59■□□□□ 0.25
Tnrc6aQ3UHK8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnrc6aQ3UHK8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnrc6aQ3UHK8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tnrc6aQ3UHK8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tnrc6aQ3UHK8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.58■□□□□ 0.25
Tnrc6aQ3UHK8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tnrc6aQ3UHK8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tnrc6aQ3UHK8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnrc6aQ3UHK8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnrc6aQ3UHK8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnrc6aQ3UHK8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Tnrc6aQ3UHK8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnrc6aQ3UHK8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tnrc6aQ3UHK8 Gm21362-201ENSMUST00000194272 928 ntBASIC16.58■□□□□ 0.24
Tnrc6aQ3UHK8 Gm45058-201ENSMUST00000205810 766 ntBASIC16.58■□□□□ 0.24
Tnrc6aQ3UHK8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.58■□□□□ 0.24
Tnrc6aQ3UHK8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tnrc6aQ3UHK8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.58■□□□□ 0.24
Tnrc6aQ3UHK8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Tnrc6aQ3UHK8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnrc6aQ3UHK8 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.58■□□□□ 0.24
Tnrc6aQ3UHK8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnrc6aQ3UHK8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnrc6aQ3UHK8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.58■□□□□ 0.24
Tnrc6aQ3UHK8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnrc6aQ3UHK8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tnrc6aQ3UHK8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnrc6aQ3UHK8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnrc6aQ3UHK8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnrc6aQ3UHK8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.57■□□□□ 0.24
Tnrc6aQ3UHK8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnrc6aQ3UHK8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnrc6aQ3UHK8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnrc6aQ3UHK8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.57■□□□□ 0.24
Tnrc6aQ3UHK8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Tnrc6aQ3UHK8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnrc6aQ3UHK8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tnrc6aQ3UHK8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tnrc6aQ3UHK8 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.56■□□□□ 0.24
Tnrc6aQ3UHK8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnrc6aQ3UHK8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnrc6aQ3UHK8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.56■□□□□ 0.24
Tnrc6aQ3UHK8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.56■□□□□ 0.24
Tnrc6aQ3UHK8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Tnrc6aQ3UHK8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Tnrc6aQ3UHK8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnrc6aQ3UHK8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnrc6aQ3UHK8 Gm10517-202ENSMUST00000192970 758 ntBASIC16.56■□□□□ 0.24
Tnrc6aQ3UHK8 Gm33142-201ENSMUST00000193913 867 ntBASIC16.56■□□□□ 0.24
Tnrc6aQ3UHK8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnrc6aQ3UHK8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnrc6aQ3UHK8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tnrc6aQ3UHK8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tnrc6aQ3UHK8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Tnrc6aQ3UHK8 Gm27463-201ENSMUST00000183569 57 ntBASIC16.55■□□□□ 0.24
Tnrc6aQ3UHK8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tnrc6aQ3UHK8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tnrc6aQ3UHK8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Tnrc6aQ3UHK8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.55■□□□□ 0.24
Tnrc6aQ3UHK8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tnrc6aQ3UHK8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.54■□□□□ 0.24
Tnrc6aQ3UHK8 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.54■□□□□ 0.24
Tnrc6aQ3UHK8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Tnrc6aQ3UHK8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tnrc6aQ3UHK8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tnrc6aQ3UHK8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tnrc6aQ3UHK8 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.54■□□□□ 0.24
Tnrc6aQ3UHK8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tnrc6aQ3UHK8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tnrc6aQ3UHK8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Tnrc6aQ3UHK8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tnrc6aQ3UHK8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tnrc6aQ3UHK8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.54■□□□□ 0.24
Tnrc6aQ3UHK8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tnrc6aQ3UHK8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tnrc6aQ3UHK8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms