Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Spg11Q3UHA3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.55■□□□□ 0.24
Spg11Q3UHA3 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.55■□□□□ 0.24
Spg11Q3UHA3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Spg11Q3UHA3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.55■□□□□ 0.24
Spg11Q3UHA3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
Spg11Q3UHA3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.55■□□□□ 0.24
Spg11Q3UHA3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Spg11Q3UHA3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.55■□□□□ 0.24
Spg11Q3UHA3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.55■□□□□ 0.24
Spg11Q3UHA3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Spg11Q3UHA3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Spg11Q3UHA3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Spg11Q3UHA3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Spg11Q3UHA3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Spg11Q3UHA3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Spg11Q3UHA3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Spg11Q3UHA3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Spg11Q3UHA3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.55■□□□□ 0.24
Spg11Q3UHA3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Spg11Q3UHA3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spg11Q3UHA3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spg11Q3UHA3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spg11Q3UHA3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spg11Q3UHA3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Spg11Q3UHA3 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.54■□□□□ 0.24
Spg11Q3UHA3 Gm11779-201ENSMUST00000118541 368 ntBASIC16.54■□□□□ 0.24
Spg11Q3UHA3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.54■□□□□ 0.24
Spg11Q3UHA3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Spg11Q3UHA3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spg11Q3UHA3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spg11Q3UHA3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Spg11Q3UHA3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spg11Q3UHA3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Spg11Q3UHA3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spg11Q3UHA3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spg11Q3UHA3 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.54■□□□□ 0.24
Spg11Q3UHA3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spg11Q3UHA3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spg11Q3UHA3 Gm14822-201ENSMUST00000122247 291 ntBASIC16.53■□□□□ 0.24
Spg11Q3UHA3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spg11Q3UHA3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spg11Q3UHA3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.53■□□□□ 0.24
Spg11Q3UHA3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.53■□□□□ 0.24
Spg11Q3UHA3 Gm15467-201ENSMUST00000120582 445 ntBASIC16.53■□□□□ 0.24
Spg11Q3UHA3 Gm12350-201ENSMUST00000121208 462 ntBASIC16.53■□□□□ 0.24
Spg11Q3UHA3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spg11Q3UHA3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Spg11Q3UHA3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.53■□□□□ 0.24
Spg11Q3UHA3 Mir5131-201ENSMUST00000175426 93 ntBASIC16.53■□□□□ 0.24
Spg11Q3UHA3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spg11Q3UHA3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Spg11Q3UHA3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Spg11Q3UHA3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Spg11Q3UHA3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Spg11Q3UHA3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Spg11Q3UHA3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.52■□□□□ 0.24
Spg11Q3UHA3 Gm4974-201ENSMUST00000209974 875 ntBASIC16.52■□□□□ 0.24
Spg11Q3UHA3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Spg11Q3UHA3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Spg11Q3UHA3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Spg11Q3UHA3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Spg11Q3UHA3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Spg11Q3UHA3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Spg11Q3UHA3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Spg11Q3UHA3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Spg11Q3UHA3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Gm4995-201ENSMUST00000117247 432 ntBASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg11Q3UHA3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.5■□□□□ 0.23
Spg11Q3UHA3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Spg11Q3UHA3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Spg11Q3UHA3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Spg11Q3UHA3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Spg11Q3UHA3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Spg11Q3UHA3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Spg11Q3UHA3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Spg11Q3UHA3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms