Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd8Q09XV5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.07■□□□□ 0.16
Chd8Q09XV5 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd8Q09XV5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Chd8Q09XV5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd8Q09XV5 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd8Q09XV5 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chd8Q09XV5 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.07■□□□□ 0.16
Chd8Q09XV5 Gm44872-201ENSMUST00000207864 420 ntBASIC16.07■□□□□ 0.16
Chd8Q09XV5 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.07■□□□□ 0.16
Chd8Q09XV5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chd8Q09XV5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd8Q09XV5 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.06■□□□□ 0.16
Chd8Q09XV5 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.06■□□□□ 0.16
Chd8Q09XV5 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.06■□□□□ 0.16
Chd8Q09XV5 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.06■□□□□ 0.16
Chd8Q09XV5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Chd8Q09XV5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chd8Q09XV5 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.06■□□□□ 0.16
Chd8Q09XV5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.06■□□□□ 0.16
Chd8Q09XV5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Chd8Q09XV5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd8Q09XV5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Chd8Q09XV5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Chd8Q09XV5 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.05■□□□□ 0.16
Chd8Q09XV5 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd8Q09XV5 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd8Q09XV5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd8Q09XV5 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chd8Q09XV5 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd8Q09XV5 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd8Q09XV5 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd8Q09XV5 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chd8Q09XV5 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.05■□□□□ 0.16
Chd8Q09XV5 Gm23547-201ENSMUST00000158210 271 ntBASIC16.05■□□□□ 0.16
Chd8Q09XV5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.05■□□□□ 0.16
Chd8Q09XV5 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.05■□□□□ 0.16
Chd8Q09XV5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Chd8Q09XV5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd8Q09XV5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chd8Q09XV5 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chd8Q09XV5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chd8Q09XV5 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.04■□□□□ 0.16
Chd8Q09XV5 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.04■□□□□ 0.16
Chd8Q09XV5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Chd8Q09XV5 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Chd8Q09XV5 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chd8Q09XV5 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.04■□□□□ 0.16
Chd8Q09XV5 Chchd1-203ENSMUST00000224633 557 ntBASIC16.04■□□□□ 0.16
Chd8Q09XV5 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Chd8Q09XV5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Chd8Q09XV5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chd8Q09XV5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Chd8Q09XV5 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.04■□□□□ 0.16
Chd8Q09XV5 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.04■□□□□ 0.16
Chd8Q09XV5 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chd8Q09XV5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chd8Q09XV5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chd8Q09XV5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chd8Q09XV5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chd8Q09XV5 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chd8Q09XV5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.03■□□□□ 0.16
Chd8Q09XV5 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chd8Q09XV5 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chd8Q09XV5 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chd8Q09XV5 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chd8Q09XV5 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chd8Q09XV5 Mir770-201ENSMUST00000103252 94 ntBASIC16.03■□□□□ 0.16
Chd8Q09XV5 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chd8Q09XV5 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.03■□□□□ 0.16
Chd8Q09XV5 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.03■□□□□ 0.16
Chd8Q09XV5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chd8Q09XV5 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chd8Q09XV5 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chd8Q09XV5 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.03■□□□□ 0.16
Chd8Q09XV5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chd8Q09XV5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Chd8Q09XV5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chd8Q09XV5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chd8Q09XV5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chd8Q09XV5 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chd8Q09XV5 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Chd8Q09XV5 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.02■□□□□ 0.16
Chd8Q09XV5 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.02■□□□□ 0.16
Chd8Q09XV5 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.02■□□□□ 0.16
Chd8Q09XV5 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Chd8Q09XV5 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chd8Q09XV5 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Chd8Q09XV5 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chd8Q09XV5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chd8Q09XV5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chd8Q09XV5 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Chd8Q09XV5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Chd8Q09XV5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Chd8Q09XV5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chd8Q09XV5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chd8Q09XV5 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chd8Q09XV5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Chd8Q09XV5 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.02■□□□□ 0.15
Chd8Q09XV5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms