Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.31■□□□□ 0.36
Brca2P97929 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Brca2P97929 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Brca2P97929 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.31■□□□□ 0.36
Brca2P97929 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Brca2P97929 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Brca2P97929 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Brca2P97929 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.31■□□□□ 0.36
Brca2P97929 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Brca2P97929 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Brca2P97929 Gm9013-201ENSMUST00000132939 882 ntBASIC17.31■□□□□ 0.36
Brca2P97929 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.31■□□□□ 0.36
Brca2P97929 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Brca2P97929 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Brca2P97929 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brca2P97929 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Brca2P97929 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.3■□□□□ 0.36
Brca2P97929 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brca2P97929 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brca2P97929 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brca2P97929 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brca2P97929 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brca2P97929 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brca2P97929 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.3■□□□□ 0.36
Brca2P97929 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Brca2P97929 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brca2P97929 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Brca2P97929 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brca2P97929 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brca2P97929 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brca2P97929 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.29■□□□□ 0.36
Brca2P97929 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brca2P97929 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brca2P97929 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brca2P97929 Gm5186-201ENSMUST00000218781 920 ntBASIC17.29■□□□□ 0.36
Brca2P97929 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Brca2P97929 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brca2P97929 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Brca2P97929 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.29■□□□□ 0.36
Brca2P97929 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brca2P97929 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brca2P97929 Gm7370-201ENSMUST00000219471 767 ntBASIC17.28■□□□□ 0.36
Brca2P97929 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brca2P97929 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brca2P97929 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brca2P97929 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brca2P97929 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brca2P97929 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.28■□□□□ 0.36
Brca2P97929 Gm27742-201ENSMUST00000184667 60 ntBASIC17.28■□□□□ 0.36
Brca2P97929 Gm38285-201ENSMUST00000192928 922 ntBASIC17.28■□□□□ 0.36
Brca2P97929 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.28■□□□□ 0.36
Brca2P97929 Birc2-201ENSMUST00000054878 378 ntBASIC17.28■□□□□ 0.36
Brca2P97929 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brca2P97929 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brca2P97929 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Brca2P97929 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.28■□□□□ 0.36
Brca2P97929 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brca2P97929 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brca2P97929 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brca2P97929 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Brca2P97929 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Brca2P97929 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.27■□□□□ 0.36
Brca2P97929 Mir3081-201ENSMUST00000175305 84 ntBASIC17.27■□□□□ 0.36
Brca2P97929 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Brca2P97929 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.27■□□□□ 0.36
Brca2P97929 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Brca2P97929 Fst-202ENSMUST00000223640 2612 ntBASIC17.27■□□□□ 0.36
Brca2P97929 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Brca2P97929 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Brca2P97929 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Brca2P97929 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Brca2P97929 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Brca2P97929 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Brca2P97929 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.27■□□□□ 0.36
Brca2P97929 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Brca2P97929 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Brca2P97929 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.27■□□□□ 0.36
Brca2P97929 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Brca2P97929 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Brca2P97929 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.35
Brca2P97929 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Brca2P97929 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Brca2P97929 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Brca2P97929 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Brca2P97929 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Brca2P97929 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Brca2P97929 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Brca2P97929 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Brca2P97929 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brca2P97929 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.26■□□□□ 0.35
Brca2P97929 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Brca2P97929 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.26■□□□□ 0.35
Brca2P97929 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
Brca2P97929 Gm27357-201ENSMUST00000183754 135 ntBASIC17.26■□□□□ 0.35
Brca2P97929 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.26■□□□□ 0.35
Brca2P97929 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brca2P97929 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.26■□□□□ 0.35
Brca2P97929 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brca2P97929 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.26■□□□□ 0.35
Brca2P97929 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms