Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
PrkdcP97313 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
PrkdcP97313 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PrkdcP97313 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PrkdcP97313 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
PrkdcP97313 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PrkdcP97313 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
PrkdcP97313 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PrkdcP97313 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PrkdcP97313 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.32□□□□□ -0.44
PrkdcP97313 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.32□□□□□ -0.44
PrkdcP97313 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.32□□□□□ -0.44
PrkdcP97313 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PrkdcP97313 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PrkdcP97313 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PrkdcP97313 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.32□□□□□ -0.44
PrkdcP97313 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.32□□□□□ -0.44
PrkdcP97313 Gm37722-201ENSMUST00000193757 208 ntBASIC12.32□□□□□ -0.44
PrkdcP97313 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.32□□□□□ -0.44
PrkdcP97313 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.32□□□□□ -0.44
PrkdcP97313 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
PrkdcP97313 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
PrkdcP97313 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
PrkdcP97313 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PrkdcP97313 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.31□□□□□ -0.44
PrkdcP97313 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PrkdcP97313 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.31□□□□□ -0.44
PrkdcP97313 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.31□□□□□ -0.44
PrkdcP97313 Rps4l-201ENSMUST00000071745 943 ntBASIC12.31□□□□□ -0.44
PrkdcP97313 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PrkdcP97313 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkdcP97313 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
PrkdcP97313 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkdcP97313 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkdcP97313 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.31□□□□□ -0.44
PrkdcP97313 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.31□□□□□ -0.44
PrkdcP97313 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.31□□□□□ -0.44
PrkdcP97313 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkdcP97313 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkdcP97313 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkdcP97313 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.31□□□□□ -0.44
PrkdcP97313 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkdcP97313 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkdcP97313 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.31□□□□□ -0.44
PrkdcP97313 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.3□□□□□ -0.44
PrkdcP97313 Gm27702-201ENSMUST00000184512 56 ntBASIC12.3□□□□□ -0.44
PrkdcP97313 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkdcP97313 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.3□□□□□ -0.44
PrkdcP97313 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkdcP97313 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.3□□□□□ -0.44
PrkdcP97313 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.3□□□□□ -0.44
PrkdcP97313 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC12.3□□□□□ -0.44
PrkdcP97313 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrkdcP97313 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkdcP97313 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrkdcP97313 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrkdcP97313 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrkdcP97313 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.3□□□□□ -0.44
PrkdcP97313 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrkdcP97313 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.3□□□□□ -0.44
PrkdcP97313 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkdcP97313 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkdcP97313 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkdcP97313 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrkdcP97313 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkdcP97313 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkdcP97313 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
PrkdcP97313 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkdcP97313 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkdcP97313 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkdcP97313 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkdcP97313 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
PrkdcP97313 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PrkdcP97313 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
PrkdcP97313 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrkdcP97313 Gm6736-201ENSMUST00000166583 948 ntBASIC12.29□□□□□ -0.44
PrkdcP97313 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.29□□□□□ -0.44
PrkdcP97313 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrkdcP97313 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
PrkdcP97313 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
PrkdcP97313 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrkdcP97313 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrkdcP97313 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PrkdcP97313 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
PrkdcP97313 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC12.29□□□□□ -0.44
PrkdcP97313 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
PrkdcP97313 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.29□□□□□ -0.44
PrkdcP97313 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrkdcP97313 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrkdcP97313 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
PrkdcP97313 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC12.29□□□□□ -0.44
PrkdcP97313 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrkdcP97313 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrkdcP97313 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.29□□□□□ -0.44
PrkdcP97313 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrkdcP97313 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.29□□□□□ -0.44
PrkdcP97313 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.29□□□□□ -0.44
PrkdcP97313 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrkdcP97313 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrkdcP97313 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms