Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43cP86449 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trim43cP86449 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43cP86449 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43cP86449 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43cP86449 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43cP86449 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim43cP86449 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43cP86449 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43cP86449 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43cP86449 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43cP86449 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43cP86449 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43cP86449 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trim43cP86449 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.45■□□□□ 0.7
Trim43cP86449 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43cP86449 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43cP86449 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43cP86449 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43cP86449 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.45■□□□□ 0.7
Trim43cP86449 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.45■□□□□ 0.7
Trim43cP86449 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43cP86449 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43cP86449 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43cP86449 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43cP86449 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trim43cP86449 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
Trim43cP86449 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim43cP86449 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim43cP86449 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim43cP86449 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim43cP86449 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim43cP86449 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.44■□□□□ 0.7
Trim43cP86449 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.44■□□□□ 0.7
Trim43cP86449 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.44■□□□□ 0.7
Trim43cP86449 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim43cP86449 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim43cP86449 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim43cP86449 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43cP86449 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.43■□□□□ 0.7
Trim43cP86449 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim43cP86449 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43cP86449 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.43■□□□□ 0.7
Trim43cP86449 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.43■□□□□ 0.7
Trim43cP86449 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Trim43cP86449 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43cP86449 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim43cP86449 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43cP86449 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.43■□□□□ 0.7
Trim43cP86449 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43cP86449 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43cP86449 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43cP86449 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43cP86449 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43cP86449 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43cP86449 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43cP86449 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43cP86449 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim43cP86449 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim43cP86449 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Trim43cP86449 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim43cP86449 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim43cP86449 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trim43cP86449 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim43cP86449 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim43cP86449 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim43cP86449 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim43cP86449 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim43cP86449 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43cP86449 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim43cP86449 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim43cP86449 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.41■□□□□ 0.7
Trim43cP86449 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43cP86449 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43cP86449 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43cP86449 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43cP86449 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.41■□□□□ 0.7
Trim43cP86449 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43cP86449 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43cP86449 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trim43cP86449 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43cP86449 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43cP86449 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43cP86449 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.4■□□□□ 0.7
Trim43cP86449 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43cP86449 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim43cP86449 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim43cP86449 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43cP86449 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43cP86449 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.4■□□□□ 0.7
Trim43cP86449 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43cP86449 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim43cP86449 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim43cP86449 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim43cP86449 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.39■□□□□ 0.7
Trim43cP86449 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim43cP86449 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim43cP86449 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim43cP86449 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim43cP86449 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms