Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CiitaP79621 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CiitaP79621 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CiitaP79621 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CiitaP79621 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CiitaP79621 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CiitaP79621 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CiitaP79621 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CiitaP79621 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CiitaP79621 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CiitaP79621 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.4■□□□□ 0.7
CiitaP79621 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CiitaP79621 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CiitaP79621 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CiitaP79621 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CiitaP79621 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CiitaP79621 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CiitaP79621 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CiitaP79621 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CiitaP79621 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CiitaP79621 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CiitaP79621 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CiitaP79621 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.39■□□□□ 0.69
CiitaP79621 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.39■□□□□ 0.69
CiitaP79621 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CiitaP79621 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.39■□□□□ 0.69
CiitaP79621 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.39■□□□□ 0.69
CiitaP79621 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.38■□□□□ 0.69
CiitaP79621 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CiitaP79621 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CiitaP79621 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CiitaP79621 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CiitaP79621 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CiitaP79621 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CiitaP79621 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CiitaP79621 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CiitaP79621 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CiitaP79621 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CiitaP79621 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CiitaP79621 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CiitaP79621 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CiitaP79621 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CiitaP79621 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.37■□□□□ 0.69
CiitaP79621 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.37■□□□□ 0.69
CiitaP79621 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CiitaP79621 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CiitaP79621 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.37■□□□□ 0.69
CiitaP79621 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CiitaP79621 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CiitaP79621 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.37■□□□□ 0.69
CiitaP79621 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CiitaP79621 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CiitaP79621 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CiitaP79621 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CiitaP79621 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
CiitaP79621 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CiitaP79621 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.36■□□□□ 0.69
CiitaP79621 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.36■□□□□ 0.69
CiitaP79621 Odf3b-204ENSMUST00000227834 930 ntBASIC19.36■□□□□ 0.69
CiitaP79621 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CiitaP79621 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CiitaP79621 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CiitaP79621 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.36■□□□□ 0.69
CiitaP79621 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CiitaP79621 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CiitaP79621 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CiitaP79621 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CiitaP79621 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CiitaP79621 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CiitaP79621 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CiitaP79621 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CiitaP79621 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.35■□□□□ 0.69
CiitaP79621 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CiitaP79621 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CiitaP79621 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CiitaP79621 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CiitaP79621 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CiitaP79621 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CiitaP79621 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.35■□□□□ 0.69
CiitaP79621 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CiitaP79621 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CiitaP79621 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CiitaP79621 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CiitaP79621 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CiitaP79621 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CiitaP79621 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CiitaP79621 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CiitaP79621 Gm15565-201ENSMUST00000118890 427 ntBASIC19.34■□□□□ 0.69
CiitaP79621 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.34■□□□□ 0.69
CiitaP79621 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.34■□□□□ 0.69
CiitaP79621 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CiitaP79621 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CiitaP79621 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CiitaP79621 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.34■□□□□ 0.69
CiitaP79621 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CiitaP79621 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CiitaP79621 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CiitaP79621 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CiitaP79621 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CiitaP79621 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms