Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Msx3P70354 Gm13148-201ENSMUST00000118892 745 ntBASIC18.4■□□□□ 0.54
Msx3P70354 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Msx3P70354 Gm38285-201ENSMUST00000192928 922 ntBASIC18.4■□□□□ 0.54
Msx3P70354 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Msx3P70354 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Msx3P70354 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msx3P70354 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msx3P70354 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msx3P70354 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.4■□□□□ 0.54
Msx3P70354 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.4■□□□□ 0.54
Msx3P70354 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Msx3P70354 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Msx3P70354 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Msx3P70354 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msx3P70354 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Msx3P70354 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Msx3P70354 Gm12933-201ENSMUST00000120203 872 ntBASIC18.39■□□□□ 0.53
Msx3P70354 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.39■□□□□ 0.53
Msx3P70354 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msx3P70354 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.39■□□□□ 0.53
Msx3P70354 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msx3P70354 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msx3P70354 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msx3P70354 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Msx3P70354 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.39■□□□□ 0.53
Msx3P70354 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msx3P70354 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msx3P70354 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msx3P70354 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msx3P70354 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msx3P70354 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msx3P70354 Rab3c-203ENSMUST00000224180 967 ntBASIC18.38■□□□□ 0.53
Msx3P70354 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msx3P70354 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Msx3P70354 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msx3P70354 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msx3P70354 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msx3P70354 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.37■□□□□ 0.53
Msx3P70354 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.37■□□□□ 0.53
Msx3P70354 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.37■□□□□ 0.53
Msx3P70354 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msx3P70354 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msx3P70354 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Msx3P70354 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msx3P70354 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msx3P70354 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Msx3P70354 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msx3P70354 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msx3P70354 Flg-201ENSMUST00000050758 1488 ntBASIC18.36■□□□□ 0.53
Msx3P70354 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msx3P70354 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Msx3P70354 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msx3P70354 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msx3P70354 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.36■□□□□ 0.53
Msx3P70354 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.35■□□□□ 0.53
Msx3P70354 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msx3P70354 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msx3P70354 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Msx3P70354 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msx3P70354 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msx3P70354 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msx3P70354 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.35■□□□□ 0.53
Msx3P70354 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msx3P70354 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msx3P70354 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.35■□□□□ 0.53
Msx3P70354 Zfp783-201ENSMUST00000095946 670 ntBASIC18.35■□□□□ 0.53
Msx3P70354 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msx3P70354 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Msx3P70354 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msx3P70354 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.35■□□□□ 0.53
Msx3P70354 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Msx3P70354 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msx3P70354 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msx3P70354 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Msx3P70354 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msx3P70354 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.34■□□□□ 0.53
Msx3P70354 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msx3P70354 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Msx3P70354 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msx3P70354 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Msx3P70354 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msx3P70354 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.34■□□□□ 0.53
Msx3P70354 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msx3P70354 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msx3P70354 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.34■□□□□ 0.53
Msx3P70354 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Msx3P70354 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msx3P70354 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msx3P70354 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msx3P70354 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.34■□□□□ 0.53
Msx3P70354 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msx3P70354 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Msx3P70354 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Msx3P70354 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msx3P70354 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Msx3P70354 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Msx3P70354 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Msx3P70354 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Msx3P70354 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms