Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Crnkl1P63154 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Crnkl1P63154 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Crnkl1P63154 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Crnkl1P63154 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Crnkl1P63154 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
Crnkl1P63154 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
Crnkl1P63154 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.7■□□□□ 0.42
Crnkl1P63154 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.7■□□□□ 0.42
Crnkl1P63154 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.7■□□□□ 0.42
Crnkl1P63154 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Crnkl1P63154 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Crnkl1P63154 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Crnkl1P63154 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Crnkl1P63154 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Crnkl1P63154 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Crnkl1P63154 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.7■□□□□ 0.42
Crnkl1P63154 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Crnkl1P63154 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Crnkl1P63154 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Crnkl1P63154 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Crnkl1P63154 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Crnkl1P63154 Smad6-203ENSMUST00000179458 273 ntBASIC17.69■□□□□ 0.42
Crnkl1P63154 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Crnkl1P63154 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Crnkl1P63154 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Crnkl1P63154 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Crnkl1P63154 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Crnkl1P63154 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Crnkl1P63154 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Crnkl1P63154 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Crnkl1P63154 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Crnkl1P63154 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Crnkl1P63154 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Crnkl1P63154 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crnkl1P63154 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crnkl1P63154 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crnkl1P63154 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crnkl1P63154 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crnkl1P63154 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crnkl1P63154 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crnkl1P63154 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Crnkl1P63154 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crnkl1P63154 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crnkl1P63154 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Crnkl1P63154 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crnkl1P63154 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Crnkl1P63154 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Crnkl1P63154 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crnkl1P63154 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Crnkl1P63154 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Crnkl1P63154 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Crnkl1P63154 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crnkl1P63154 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.67■□□□□ 0.42
Crnkl1P63154 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crnkl1P63154 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crnkl1P63154 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.67■□□□□ 0.42
Crnkl1P63154 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crnkl1P63154 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Crnkl1P63154 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crnkl1P63154 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crnkl1P63154 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crnkl1P63154 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crnkl1P63154 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Crnkl1P63154 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Crnkl1P63154 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Crnkl1P63154 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crnkl1P63154 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crnkl1P63154 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crnkl1P63154 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.66■□□□□ 0.42
Crnkl1P63154 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crnkl1P63154 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.66■□□□□ 0.42
Crnkl1P63154 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crnkl1P63154 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crnkl1P63154 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crnkl1P63154 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Crnkl1P63154 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crnkl1P63154 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.66■□□□□ 0.42
Crnkl1P63154 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crnkl1P63154 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crnkl1P63154 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crnkl1P63154 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crnkl1P63154 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crnkl1P63154 Gm11421-201ENSMUST00000122124 294 ntBASIC17.66■□□□□ 0.42
Crnkl1P63154 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.66■□□□□ 0.42
Crnkl1P63154 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Crnkl1P63154 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
Crnkl1P63154 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crnkl1P63154 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.66■□□□□ 0.42
Crnkl1P63154 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crnkl1P63154 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Crnkl1P63154 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crnkl1P63154 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crnkl1P63154 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crnkl1P63154 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crnkl1P63154 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crnkl1P63154 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Crnkl1P63154 Gm43060-201ENSMUST00000200621 289 ntBASIC17.65■□□□□ 0.42
Crnkl1P63154 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crnkl1P63154 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms