Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm3P62311 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm3P62311 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm3P62311 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.37■□□□□ 0.21
Lsm3P62311 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.37■□□□□ 0.21
Lsm3P62311 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.37■□□□□ 0.21
Lsm3P62311 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Lsm3P62311 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm3P62311 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm3P62311 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm3P62311 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm3P62311 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm3P62311 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.37■□□□□ 0.21
Lsm3P62311 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm3P62311 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.36■□□□□ 0.21
Lsm3P62311 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm3P62311 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm3P62311 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm3P62311 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm3P62311 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm3P62311 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm3P62311 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Lsm3P62311 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm3P62311 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm3P62311 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm3P62311 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm3P62311 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm3P62311 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm3P62311 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm3P62311 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm3P62311 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm3P62311 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm3P62311 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm3P62311 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm3P62311 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.35■□□□□ 0.21
Lsm3P62311 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm3P62311 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.35■□□□□ 0.21
Lsm3P62311 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm3P62311 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Lsm3P62311 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm3P62311 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm3P62311 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm3P62311 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm3P62311 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.35■□□□□ 0.21
Lsm3P62311 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm3P62311 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm3P62311 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm3P62311 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Lsm3P62311 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm3P62311 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm3P62311 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm3P62311 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm3P62311 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm3P62311 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Lsm3P62311 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm3P62311 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm3P62311 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm3P62311 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm3P62311 Mir6538-201ENSMUST00000183713 110 ntBASIC16.34■□□□□ 0.21
Lsm3P62311 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm3P62311 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm3P62311 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm3P62311 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm3P62311 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm3P62311 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.34■□□□□ 0.21
Lsm3P62311 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Lsm3P62311 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Lsm3P62311 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Lsm3P62311 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.21
Lsm3P62311 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lsm3P62311 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm3P62311 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.33■□□□□ 0.2
Lsm3P62311 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm3P62311 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm3P62311 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.33■□□□□ 0.2
Lsm3P62311 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.33■□□□□ 0.2
Lsm3P62311 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm3P62311 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm3P62311 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm3P62311 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.33■□□□□ 0.2
Lsm3P62311 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Lsm3P62311 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm3P62311 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm3P62311 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm3P62311 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm3P62311 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm3P62311 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lsm3P62311 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm3P62311 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.32■□□□□ 0.2
Lsm3P62311 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm3P62311 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lsm3P62311 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.32■□□□□ 0.2
Lsm3P62311 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.32■□□□□ 0.2
Lsm3P62311 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.32■□□□□ 0.2
Lsm3P62311 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm3P62311 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm3P62311 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm3P62311 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Lsm3P62311 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm3P62311 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms