Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cks2P56390 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.96□□□□□ -0.01
Cks2P56390 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cks2P56390 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Cks2P56390 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cks2P56390 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cks2P56390 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cks2P56390 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.02
Cks2P56390 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.95□□□□□ -0.02
Cks2P56390 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Cks2P56390 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cks2P56390 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cks2P56390 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.95□□□□□ -0.02
Cks2P56390 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Cks2P56390 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cks2P56390 Gm13534-201ENSMUST00000121169 513 ntBASIC14.95□□□□□ -0.02
Cks2P56390 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.95□□□□□ -0.02
Cks2P56390 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.95□□□□□ -0.02
Cks2P56390 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cks2P56390 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cks2P56390 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cks2P56390 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cks2P56390 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cks2P56390 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cks2P56390 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cks2P56390 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cks2P56390 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Cks2P56390 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.94□□□□□ -0.02
Cks2P56390 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cks2P56390 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cks2P56390 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cks2P56390 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cks2P56390 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cks2P56390 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Cks2P56390 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cks2P56390 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cks2P56390 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cks2P56390 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cks2P56390 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cks2P56390 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cks2P56390 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cks2P56390 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cks2P56390 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cks2P56390 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cks2P56390 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cks2P56390 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cks2P56390 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cks2P56390 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
Cks2P56390 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cks2P56390 Reep4-203ENSMUST00000226563 1444 ntBASIC14.93□□□□□ -0.02
Cks2P56390 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cks2P56390 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cks2P56390 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cks2P56390 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cks2P56390 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cks2P56390 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cks2P56390 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cks2P56390 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cks2P56390 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.93□□□□□ -0.02
Cks2P56390 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cks2P56390 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cks2P56390 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cks2P56390 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Cks2P56390 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cks2P56390 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.92□□□□□ -0.02
Cks2P56390 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks2P56390 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cks2P56390 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks2P56390 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks2P56390 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks2P56390 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.92□□□□□ -0.02
Cks2P56390 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks2P56390 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks2P56390 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.92□□□□□ -0.02
Cks2P56390 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cks2P56390 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
Cks2P56390 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cks2P56390 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks2P56390 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks2P56390 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks2P56390 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cks2P56390 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cks2P56390 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cks2P56390 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cks2P56390 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cks2P56390 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cks2P56390 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Cks2P56390 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cks2P56390 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cks2P56390 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cks2P56390 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cks2P56390 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cks2P56390 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Cks2P56390 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cks2P56390 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cks2P56390 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cks2P56390 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.91□□□□□ -0.02
Cks2P56390 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cks2P56390 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cks2P56390 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms