Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NcanP55066 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
NcanP55066 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NcanP55066 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.94■□□□□ 0.62
NcanP55066 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NcanP55066 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NcanP55066 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NcanP55066 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.93■□□□□ 0.62
NcanP55066 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NcanP55066 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NcanP55066 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NcanP55066 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NcanP55066 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
NcanP55066 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.92■□□□□ 0.62
NcanP55066 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
NcanP55066 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.92■□□□□ 0.62
NcanP55066 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.92■□□□□ 0.62
NcanP55066 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
NcanP55066 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.92■□□□□ 0.62
NcanP55066 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.92■□□□□ 0.62
NcanP55066 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
NcanP55066 Birc2-201ENSMUST00000054878 378 ntBASIC18.92■□□□□ 0.62
NcanP55066 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NcanP55066 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NcanP55066 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NcanP55066 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NcanP55066 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NcanP55066 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NcanP55066 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NcanP55066 Olfr129-201ENSMUST00000122318 993 ntBASIC18.91■□□□□ 0.62
NcanP55066 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.91■□□□□ 0.62
NcanP55066 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NcanP55066 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.91■□□□□ 0.62
NcanP55066 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.91■□□□□ 0.62
NcanP55066 Mir8098-201ENSMUST00000184011 137 ntBASIC18.91■□□□□ 0.62
NcanP55066 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NcanP55066 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NcanP55066 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NcanP55066 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NcanP55066 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NcanP55066 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NcanP55066 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NcanP55066 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NcanP55066 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NcanP55066 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NcanP55066 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NcanP55066 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NcanP55066 Gm13884-201ENSMUST00000118103 829 ntBASIC18.9■□□□□ 0.62
NcanP55066 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.9■□□□□ 0.62
NcanP55066 Gm6623-201ENSMUST00000173570 544 ntBASIC18.9■□□□□ 0.62
NcanP55066 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.9■□□□□ 0.62
NcanP55066 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.9■□□□□ 0.62
NcanP55066 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NcanP55066 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NcanP55066 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.9■□□□□ 0.62
NcanP55066 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NcanP55066 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NcanP55066 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.89■□□□□ 0.61
NcanP55066 Mir770-201ENSMUST00000103252 94 ntBASIC18.89■□□□□ 0.61
NcanP55066 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
NcanP55066 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.89■□□□□ 0.61
NcanP55066 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NcanP55066 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NcanP55066 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NcanP55066 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.89■□□□□ 0.61
NcanP55066 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NcanP55066 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NcanP55066 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NcanP55066 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NcanP55066 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NcanP55066 Golph3-202ENSMUST00000226517 2359 ntBASIC18.89■□□□□ 0.61
NcanP55066 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NcanP55066 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.88■□□□□ 0.61
NcanP55066 Gm10576-201ENSMUST00000191927 825 ntBASIC18.88■□□□□ 0.61
NcanP55066 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NcanP55066 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NcanP55066 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NcanP55066 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NcanP55066 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NcanP55066 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NcanP55066 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NcanP55066 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NcanP55066 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NcanP55066 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.87■□□□□ 0.61
NcanP55066 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
NcanP55066 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NcanP55066 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NcanP55066 Gm26039-201ENSMUST00000158152 144 ntBASIC18.87■□□□□ 0.61
NcanP55066 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NcanP55066 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NcanP55066 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NcanP55066 Gm2213-201ENSMUST00000197485 688 ntBASIC18.87■□□□□ 0.61
NcanP55066 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.87■□□□□ 0.61
NcanP55066 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.87■□□□□ 0.61
NcanP55066 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.87■□□□□ 0.61
NcanP55066 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NcanP55066 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
NcanP55066 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
NcanP55066 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NcanP55066 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms