Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Brca1P48754 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Brca1P48754 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brca1P48754 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brca1P48754 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brca1P48754 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brca1P48754 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brca1P48754 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brca1P48754 BC021767-201ENSMUST00000126387 1716 ntBASIC20.2■□□□□ 0.82
Brca1P48754 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brca1P48754 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brca1P48754 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brca1P48754 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.2■□□□□ 0.82
Brca1P48754 Gm13474-201ENSMUST00000122466 815 ntBASIC20.2■□□□□ 0.82
Brca1P48754 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brca1P48754 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brca1P48754 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Brca1P48754 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Brca1P48754 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Brca1P48754 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.19■□□□□ 0.82
Brca1P48754 Gm7638-201ENSMUST00000121348 967 ntBASIC20.19■□□□□ 0.82
Brca1P48754 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC20.19■□□□□ 0.82
Brca1P48754 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Brca1P48754 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Brca1P48754 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Brca1P48754 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Brca1P48754 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Brca1P48754 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Brca1P48754 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Brca1P48754 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Brca1P48754 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.18■□□□□ 0.82
Brca1P48754 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Brca1P48754 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Brca1P48754 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Brca1P48754 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.18■□□□□ 0.82
Brca1P48754 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Brca1P48754 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC20.18■□□□□ 0.82
Brca1P48754 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.18■□□□□ 0.82
Brca1P48754 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Brca1P48754 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Brca1P48754 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Brca1P48754 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Brca1P48754 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
Brca1P48754 Gm29791-202ENSMUST00000207888 369 ntBASIC20.17■□□□□ 0.82
Brca1P48754 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Brca1P48754 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Brca1P48754 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Brca1P48754 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.16■□□□□ 0.82
Brca1P48754 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Brca1P48754 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Brca1P48754 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Brca1P48754 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Brca1P48754 Gm27389-201ENSMUST00000183622 195 ntBASIC20.16■□□□□ 0.82
Brca1P48754 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.16■□□□□ 0.82
Brca1P48754 Gm21559-201ENSMUST00000220638 855 ntBASIC20.16■□□□□ 0.82
Brca1P48754 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Brca1P48754 Gm8587-201ENSMUST00000076538 843 ntBASIC20.16■□□□□ 0.82
Brca1P48754 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Brca1P48754 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Brca1P48754 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Brca1P48754 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Brca1P48754 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Brca1P48754 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Brca1P48754 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Brca1P48754 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20.16■□□□□ 0.82
Brca1P48754 Gm11950-201ENSMUST00000121615 838 ntBASIC20.16■□□□□ 0.82
Brca1P48754 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.16■□□□□ 0.82
Brca1P48754 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Brca1P48754 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Brca1P48754 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Brca1P48754 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Brca1P48754 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Brca1P48754 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.15■□□□□ 0.82
Brca1P48754 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Brca1P48754 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Brca1P48754 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Brca1P48754 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Brca1P48754 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Brca1P48754 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Brca1P48754 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Brca1P48754 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Brca1P48754 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Brca1P48754 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Brca1P48754 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Brca1P48754 Notumos-201ENSMUST00000151998 2659 ntBASIC20.14■□□□□ 0.81
Brca1P48754 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Brca1P48754 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.14■□□□□ 0.81
Brca1P48754 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Brca1P48754 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brca1P48754 Gm24589-201ENSMUST00000116692 94 ntBASIC20.13■□□□□ 0.81
Brca1P48754 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC20.13■□□□□ 0.81
Brca1P48754 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Brca1P48754 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.13■□□□□ 0.81
Brca1P48754 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Brca1P48754 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Brca1P48754 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brca1P48754 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Brca1P48754 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Brca1P48754 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Brca1P48754 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms