Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.15■□□□□ 0.5
Vps4bP46467 Gm8969-201ENSMUST00000199694 526 ntBASIC18.15■□□□□ 0.5
Vps4bP46467 AV356131-201ENSMUST00000206201 750 ntBASIC18.15■□□□□ 0.5
Vps4bP46467 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Vps4bP46467 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps4bP46467 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps4bP46467 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps4bP46467 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.15■□□□□ 0.5
Vps4bP46467 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps4bP46467 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps4bP46467 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps4bP46467 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vps4bP46467 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps4bP46467 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Vps4bP46467 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vps4bP46467 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.14■□□□□ 0.49
Vps4bP46467 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps4bP46467 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
Vps4bP46467 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vps4bP46467 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps4bP46467 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vps4bP46467 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps4bP46467 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps4bP46467 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
Vps4bP46467 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps4bP46467 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Vps4bP46467 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.13■□□□□ 0.49
Vps4bP46467 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps4bP46467 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.13■□□□□ 0.49
Vps4bP46467 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.13■□□□□ 0.49
Vps4bP46467 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.13■□□□□ 0.49
Vps4bP46467 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.13■□□□□ 0.49
Vps4bP46467 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.13■□□□□ 0.49
Vps4bP46467 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vps4bP46467 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.13■□□□□ 0.49
Vps4bP46467 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vps4bP46467 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Vps4bP46467 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vps4bP46467 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Vps4bP46467 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.12■□□□□ 0.49
Vps4bP46467 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vps4bP46467 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vps4bP46467 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vps4bP46467 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.12■□□□□ 0.49
Vps4bP46467 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps4bP46467 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.12■□□□□ 0.49
Vps4bP46467 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vps4bP46467 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vps4bP46467 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps4bP46467 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps4bP46467 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Vps4bP46467 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.11■□□□□ 0.49
Vps4bP46467 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps4bP46467 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps4bP46467 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps4bP46467 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vps4bP46467 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.11■□□□□ 0.49
Vps4bP46467 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps4bP46467 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps4bP46467 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps4bP46467 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps4bP46467 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps4bP46467 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps4bP46467 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vps4bP46467 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps4bP46467 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps4bP46467 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps4bP46467 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vps4bP46467 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps4bP46467 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Vps4bP46467 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps4bP46467 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.09■□□□□ 0.49
Vps4bP46467 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps4bP46467 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps4bP46467 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps4bP46467 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.09■□□□□ 0.49
Vps4bP46467 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Vps4bP46467 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Vps4bP46467 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps4bP46467 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.09■□□□□ 0.49
Vps4bP46467 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.09■□□□□ 0.49
Vps4bP46467 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Vps4bP46467 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps4bP46467 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps4bP46467 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps4bP46467 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Vps4bP46467 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps4bP46467 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps4bP46467 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps4bP46467 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps4bP46467 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Vps4bP46467 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Vps4bP46467 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.08■□□□□ 0.48
Vps4bP46467 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.08■□□□□ 0.48
Vps4bP46467 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps4bP46467 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.08■□□□□ 0.48
Vps4bP46467 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Vps4bP46467 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps4bP46467 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Vps4bP46467 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms