Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc2P43407 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.05■□□□□ 0.8
Sdc2P43407 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.05■□□□□ 0.8
Sdc2P43407 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Sdc2P43407 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc2P43407 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc2P43407 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.05■□□□□ 0.8
Sdc2P43407 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc2P43407 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc2P43407 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc2P43407 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc2P43407 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc2P43407 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc2P43407 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc2P43407 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc2P43407 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.04■□□□□ 0.8
Sdc2P43407 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.04■□□□□ 0.8
Sdc2P43407 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc2P43407 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc2P43407 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc2P43407 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc2P43407 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc2P43407 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc2P43407 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Sdc2P43407 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc2P43407 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc2P43407 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc2P43407 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.03■□□□□ 0.8
Sdc2P43407 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc2P43407 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc2P43407 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc2P43407 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc2P43407 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.03■□□□□ 0.8
Sdc2P43407 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc2P43407 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc2P43407 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc2P43407 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc2P43407 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc2P43407 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc2P43407 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc2P43407 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc2P43407 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc2P43407 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.03■□□□□ 0.8
Sdc2P43407 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
Sdc2P43407 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc2P43407 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Sdc2P43407 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.02■□□□□ 0.8
Sdc2P43407 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sdc2P43407 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sdc2P43407 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sdc2P43407 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Sdc2P43407 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sdc2P43407 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sdc2P43407 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sdc2P43407 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sdc2P43407 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Sdc2P43407 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.02■□□□□ 0.8
Sdc2P43407 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Sdc2P43407 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sdc2P43407 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sdc2P43407 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc2P43407 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
Sdc2P43407 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.01■□□□□ 0.79
Sdc2P43407 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc2P43407 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc2P43407 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc2P43407 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc2P43407 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc2P43407 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc2P43407 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc2P43407 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.01■□□□□ 0.79
Sdc2P43407 Gm6365-201ENSMUST00000054711 744 ntBASIC20.01■□□□□ 0.79
Sdc2P43407 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc2P43407 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.01■□□□□ 0.79
Sdc2P43407 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc2P43407 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc2P43407 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sdc2P43407 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sdc2P43407 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sdc2P43407 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Sdc2P43407 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20■□□□□ 0.79
Sdc2P43407 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sdc2P43407 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Sdc2P43407 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sdc2P43407 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sdc2P43407 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sdc2P43407 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Sdc2P43407 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sdc2P43407 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sdc2P43407 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sdc2P43407 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.99■□□□□ 0.79
Sdc2P43407 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sdc2P43407 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sdc2P43407 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sdc2P43407 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sdc2P43407 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sdc2P43407 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sdc2P43407 Gm18284-201ENSMUST00000172604 624 ntBASIC19.99■□□□□ 0.79
Sdc2P43407 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.99■□□□□ 0.79
Sdc2P43407 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms