Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsf9P41274 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsf9P41274 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsf9P41274 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.12■□□□□ 0.33
Tnfsf9P41274 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf9P41274 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf9P41274 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf9P41274 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf9P41274 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Tnfsf9P41274 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tnfsf9P41274 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tnfsf9P41274 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf9P41274 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tnfsf9P41274 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tnfsf9P41274 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf9P41274 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf9P41274 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf9P41274 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf9P41274 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf9P41274 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tnfsf9P41274 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf9P41274 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf9P41274 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf9P41274 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Tnfsf9P41274 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf9P41274 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.1■□□□□ 0.33
Tnfsf9P41274 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf9P41274 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tnfsf9P41274 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf9P41274 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf9P41274 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf9P41274 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf9P41274 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf9P41274 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf9P41274 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tnfsf9P41274 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf9P41274 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tnfsf9P41274 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.09■□□□□ 0.33
Tnfsf9P41274 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Tnfsf9P41274 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf9P41274 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf9P41274 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.09■□□□□ 0.33
Tnfsf9P41274 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf9P41274 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tnfsf9P41274 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf9P41274 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.09■□□□□ 0.33
Tnfsf9P41274 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf9P41274 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf9P41274 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf9P41274 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf9P41274 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.09■□□□□ 0.33
Tnfsf9P41274 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf9P41274 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tnfsf9P41274 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf9P41274 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Tnfsf9P41274 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfsf9P41274 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfsf9P41274 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfsf9P41274 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.08■□□□□ 0.32
Tnfsf9P41274 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfsf9P41274 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfsf9P41274 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.08■□□□□ 0.32
Tnfsf9P41274 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfsf9P41274 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfsf9P41274 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfsf9P41274 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfsf9P41274 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsf9P41274 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Tnfsf9P41274 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Tnfsf9P41274 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsf9P41274 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsf9P41274 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.07■□□□□ 0.32
Tnfsf9P41274 Gm37055-201ENSMUST00000191866 133 ntBASIC17.07■□□□□ 0.32
Tnfsf9P41274 Gm37292-201ENSMUST00000192062 758 ntBASIC17.07■□□□□ 0.32
Tnfsf9P41274 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.07■□□□□ 0.32
Tnfsf9P41274 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsf9P41274 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsf9P41274 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsf9P41274 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Tnfsf9P41274 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsf9P41274 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsf9P41274 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.07■□□□□ 0.32
Tnfsf9P41274 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfsf9P41274 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfsf9P41274 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Tnfsf9P41274 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Tnfsf9P41274 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfsf9P41274 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfsf9P41274 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Tnfsf9P41274 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfsf9P41274 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Tnfsf9P41274 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.06■□□□□ 0.32
Tnfsf9P41274 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Tnfsf9P41274 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.06■□□□□ 0.32
Tnfsf9P41274 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.06■□□□□ 0.32
Tnfsf9P41274 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.06■□□□□ 0.32
Tnfsf9P41274 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfsf9P41274 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Tnfsf9P41274 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfsf9P41274 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms