Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd9P40240 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd9P40240 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.66■□□□□ 0.42
Cd9P40240 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.66■□□□□ 0.42
Cd9P40240 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.66■□□□□ 0.42
Cd9P40240 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd9P40240 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cd9P40240 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cd9P40240 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd9P40240 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cd9P40240 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd9P40240 Gm11249-201ENSMUST00000117071 859 ntBASIC17.65■□□□□ 0.42
Cd9P40240 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.65■□□□□ 0.42
Cd9P40240 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd9P40240 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cd9P40240 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cd9P40240 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd9P40240 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Cd9P40240 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.64■□□□□ 0.42
Cd9P40240 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cd9P40240 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd9P40240 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd9P40240 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd9P40240 Gm12896-201ENSMUST00000118430 226 ntBASIC17.64■□□□□ 0.41
Cd9P40240 Gm12441-201ENSMUST00000121806 588 ntBASIC17.64■□□□□ 0.41
Cd9P40240 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.64■□□□□ 0.41
Cd9P40240 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cd9P40240 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.64■□□□□ 0.41
Cd9P40240 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.64■□□□□ 0.41
Cd9P40240 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd9P40240 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.64■□□□□ 0.41
Cd9P40240 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.64■□□□□ 0.41
Cd9P40240 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd9P40240 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd9P40240 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd9P40240 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cd9P40240 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cd9P40240 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd9P40240 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd9P40240 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd9P40240 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
Cd9P40240 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Cd9P40240 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd9P40240 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
Cd9P40240 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd9P40240 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd9P40240 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd9P40240 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd9P40240 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd9P40240 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd9P40240 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
Cd9P40240 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.63■□□□□ 0.41
Cd9P40240 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd9P40240 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cd9P40240 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd9P40240 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd9P40240 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd9P40240 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.62■□□□□ 0.41
Cd9P40240 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd9P40240 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cd9P40240 Gm15375-201ENSMUST00000119510 849 ntBASIC17.62■□□□□ 0.41
Cd9P40240 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.62■□□□□ 0.41
Cd9P40240 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.62■□□□□ 0.41
Cd9P40240 Gm20049-201ENSMUST00000219950 730 ntBASIC17.62■□□□□ 0.41
Cd9P40240 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd9P40240 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cd9P40240 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd9P40240 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.62■□□□□ 0.41
Cd9P40240 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd9P40240 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cd9P40240 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cd9P40240 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.62■□□□□ 0.41
Cd9P40240 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd9P40240 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cd9P40240 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd9P40240 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd9P40240 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd9P40240 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd9P40240 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd9P40240 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd9P40240 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cd9P40240 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd9P40240 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd9P40240 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd9P40240 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.61■□□□□ 0.41
Cd9P40240 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd9P40240 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd9P40240 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.6■□□□□ 0.41
Cd9P40240 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd9P40240 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.6■□□□□ 0.41
Cd9P40240 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd9P40240 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd9P40240 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd9P40240 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.6■□□□□ 0.41
Cd9P40240 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cd9P40240 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cd9P40240 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd9P40240 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Cd9P40240 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd9P40240 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms